Gene PA14_04110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_04110 
SymbolserA 
ID4383721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp369396 
End bp370625 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content63% 
IMG OID639322886 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_788486 
Protein GI116054043 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CCTCTCTCGA CAAGAGCAAG ATCAAGTTCC TTCTTCTCGA AGGTGTCCAC 
CAGAACGCCG TGGACACGCT GAAGGCCGCC GGCTACACCA ACATCGAGTA CCTCAAGACC
GCGCTTTCCG GCGACGAGCT GAAGGAAAGG ATCGCCGATG CGCACTTCAT CGGCATTCGC
TCCCGCACCC AGCTGACCGA AGAGGTCTTC GACTGCGCGA AGAAACTGAT CGCGGTCGGC
TGCTTCTGCA TCGGCACCAA CCAGGTCGAC CTCAACGCCG CTCGCGAACG CGGTATCGCC
GTGTTCAACG CGCCCTACTC GAACACCCGC TCTGTGGCTG AGCTGGTACT GGCCGAGGCG
ATCCTGCTGC TGCGCGGCAT CCCGGAAAAG AACGCTTCCT GCCATCGCGG CGGCTGGATC
AAGAGCGCGG CGAACTCCTT CGAGATCCGT GGCAAGAAGC TCGGCATCGT CGGCTACGGT
TCGATCGGCA CCCAGCTCTC GGTACTCGCC GAGGCCCTGG GCATGCAGGT GTTCTTCTAC
GACACCGTGA CCAAGCTGCC GCTGGGCAAC GCGGTGCAGA TCGGCAGCCT GCACGAGCTG
CTGGGCATGT CCGACATCGT CTCGCTGCAC GTTCCCGAAC TGCCCTCCAC CCAGTGGATG
ATCGGCGAGA AGGAAATCCG CGCGATGAAG AAGGGCGGCA TCCTGATCAA CGCCGCGCGC
GGCACCGTGG TCGAGCTGGA CCACCTGGCC GCCGCGATCA AGGATGAGCA CCTGATCGGC
GCCGCCATCG ACGTGTTCCC GGTCGAGCCG AAATCCAACG ACGAGGAATT CGCCAGCCCG
CTGCGTGGCC TGGACCGGGT GATCCTGACC CCGCACATCG GCGGCTCCAC CGCCGAGGCA
CAGGCCAACA TCGGCCTGGA AGTGGCGGAG AAGCTGGTCA AGTACAGCGA CAACGGCACC
TCGGTGTCCT CGGTCAACTT CCCCGAAGTG GCCCTGCCGT CGCACCCGGG CAAGCACCGC
CTGCTGCACA TCCACGCCAA CATCCCCGGC GTGATGAGCG AGATCAACAA GGTCTTCGCC
GACAACGGCA TCAACGTTTC CGGCCAGTAC CTGCAAACCA ACGATAAGGT CGGCTACGTG
GTGATCGACG TCGACGCCGA GTACTCCGAC CTGGCCCTGG AGAAACTCCA GCAGGTCAAC
GGCACCATCC GTAGCCGCGT GCTGTTCTAA
 
Protein sequence
MSKTSLDKSK IKFLLLEGVH QNAVDTLKAA GYTNIEYLKT ALSGDELKER IADAHFIGIR 
SRTQLTEEVF DCAKKLIAVG CFCIGTNQVD LNAARERGIA VFNAPYSNTR SVAELVLAEA
ILLLRGIPEK NASCHRGGWI KSAANSFEIR GKKLGIVGYG SIGTQLSVLA EALGMQVFFY
DTVTKLPLGN AVQIGSLHEL LGMSDIVSLH VPELPSTQWM IGEKEIRAMK KGGILINAAR
GTVVELDHLA AAIKDEHLIG AAIDVFPVEP KSNDEEFASP LRGLDRVILT PHIGGSTAEA
QANIGLEVAE KLVKYSDNGT SVSSVNFPEV ALPSHPGKHR LLHIHANIPG VMSEINKVFA
DNGINVSGQY LQTNDKVGYV VIDVDAEYSD LALEKLQQVN GTIRSRVLF