Gene PA14_03960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_03960 
SymbolspuH 
ID4383708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp357381 
End bp358250 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content65% 
IMG OID639322873 
Productpolyamine transport protein PotI 
Protein accessionYP_788473 
Protein GI116054030 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCT GGAATTTCTC CAACGTCATG CTGATCGTCG GCCTGCTCTT CATCTACCTG 
CCGATGCTGA TCCTGGTGAT CTATTCGTTC AACGCCTCCA AGCTGGTGAC GGTGTGGGGC
GGCTGGTCGG TGAAGTGGTA CGTCGGCCTG CTGGACAACA CCCAACTGGT CAGTTCGGTC
GGCCGCTCCC TGGAGATCGC CTTCTATACG GCGTTCTCCT CGGTGCTCCT CGGCACCCTG
GCGGCCTTCG TCCTCACCCG CATCCCGCGC TTCCGCGGTC GTACGCTGTT CGGCGGCATG
GTCACCGCGC CGCTGGTGAT GCCGGAAGTG ATCACCGGCC TGTCGCTGCT GCTGTTGTTC
GTGGCCATGG CGCAACTGAT CGGCTGGCCG CAGGAACGGG GTATCGTGAC CATCTGGATC
GCCCACACCA GCTTCTGCTC GTCCTACGTG GCGGTGGTGG TGTCGGCGCG CCTGCGTGAA
CTCGACCTGT CGATCGAGGA AGCGGCGATG GACCTGGGCG CCAAGCCCTG GAAGGTGTTC
CTGCTGATCA CCATCCCGAT GATCGCGCCC TCGCTGGCGG CGGGCGGCAT GATGTCCTTC
GCCCTGTCGC TGGACGACCT GGTACTGGCC AGCTTCGTCT CCGGACCCGG CTCGACCACC
TTGCCGATGG AAGTGTTCTC GGCGGTACGC CTGGGCGTGA AGCCGGAGAT CAACGCGGTG
GCCAGCCTGA TCCTGCTGAG CGTTTCGCTG TTCACCTTCT TCGCCTGGTA CTTCACCCGC
CAGGCCGAGG AGCGGCGTCG CCGGGCGATC CAGCAGGCGA TGGAAGAGAC CGCGACCGAC
TGGCAGAAAG GCTCGCCGAC CCCGGCCTGA
 
Protein sequence
MKRWNFSNVM LIVGLLFIYL PMLILVIYSF NASKLVTVWG GWSVKWYVGL LDNTQLVSSV 
GRSLEIAFYT AFSSVLLGTL AAFVLTRIPR FRGRTLFGGM VTAPLVMPEV ITGLSLLLLF
VAMAQLIGWP QERGIVTIWI AHTSFCSSYV AVVVSARLRE LDLSIEEAAM DLGAKPWKVF
LLITIPMIAP SLAAGGMMSF ALSLDDLVLA SFVSGPGSTT LPMEVFSAVR LGVKPEINAV
ASLILLSVSL FTFFAWYFTR QAEERRRRAI QQAMEETATD WQKGSPTPA