Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_03960 |
Symbol | spuH |
ID | 4383708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 357381 |
End bp | 358250 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639322873 |
Product | polyamine transport protein PotI |
Protein accession | YP_788473 |
Protein GI | 116054030 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCT GGAATTTCTC CAACGTCATG CTGATCGTCG GCCTGCTCTT CATCTACCTG CCGATGCTGA TCCTGGTGAT CTATTCGTTC AACGCCTCCA AGCTGGTGAC GGTGTGGGGC GGCTGGTCGG TGAAGTGGTA CGTCGGCCTG CTGGACAACA CCCAACTGGT CAGTTCGGTC GGCCGCTCCC TGGAGATCGC CTTCTATACG GCGTTCTCCT CGGTGCTCCT CGGCACCCTG GCGGCCTTCG TCCTCACCCG CATCCCGCGC TTCCGCGGTC GTACGCTGTT CGGCGGCATG GTCACCGCGC CGCTGGTGAT GCCGGAAGTG ATCACCGGCC TGTCGCTGCT GCTGTTGTTC GTGGCCATGG CGCAACTGAT CGGCTGGCCG CAGGAACGGG GTATCGTGAC CATCTGGATC GCCCACACCA GCTTCTGCTC GTCCTACGTG GCGGTGGTGG TGTCGGCGCG CCTGCGTGAA CTCGACCTGT CGATCGAGGA AGCGGCGATG GACCTGGGCG CCAAGCCCTG GAAGGTGTTC CTGCTGATCA CCATCCCGAT GATCGCGCCC TCGCTGGCGG CGGGCGGCAT GATGTCCTTC GCCCTGTCGC TGGACGACCT GGTACTGGCC AGCTTCGTCT CCGGACCCGG CTCGACCACC TTGCCGATGG AAGTGTTCTC GGCGGTACGC CTGGGCGTGA AGCCGGAGAT CAACGCGGTG GCCAGCCTGA TCCTGCTGAG CGTTTCGCTG TTCACCTTCT TCGCCTGGTA CTTCACCCGC CAGGCCGAGG AGCGGCGTCG CCGGGCGATC CAGCAGGCGA TGGAAGAGAC CGCGACCGAC TGGCAGAAAG GCTCGCCGAC CCCGGCCTGA
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Protein sequence | MKRWNFSNVM LIVGLLFIYL PMLILVIYSF NASKLVTVWG GWSVKWYVGL LDNTQLVSSV GRSLEIAFYT AFSSVLLGTL AAFVLTRIPR FRGRTLFGGM VTAPLVMPEV ITGLSLLLLF VAMAQLIGWP QERGIVTIWI AHTSFCSSYV AVVVSARLRE LDLSIEEAAM DLGAKPWKVF LLITIPMIAP SLAAGGMMSF ALSLDDLVLA SFVSGPGSTT LPMEVFSAVR LGVKPEINAV ASLILLSVSL FTFFAWYFTR QAEERRRRAI QQAMEETATD WQKGSPTPA
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