Gene PA14_03940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_03940 
SymbolspuF 
ID4383706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp355236 
End bp356390 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content65% 
IMG OID639322871 
Productpolyamine transport protein PotG 
Protein accessionYP_788471 
Protein GI116054028 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATAG CCTCCGGTGC CTACAAGAAA GCCCTAGAGG GCAACCAGCA GCCGAAAGAG 
GTGCTGGTAA AGATCGACCG GGTAACCAAG CAGTTCGACG AGACGCTGGC GGTGGACACC
GTGTCCCTGA CCATCAACAA GGGCGAGATC TTCGCCCTGC TCGGCGGCTC CGGCTCGGGT
AAATCCACCC TGTTGCGCAT GCTCGCCGGT TTCGAGCGGC CCACCGAGGG GCGGATCTTC
CTCGATGGCC AGGACATCAC CGACCTGCCG CCCTACGAGC GACCGATCAA CATGATGTTC
CAGTCCTATG CGCTGTTCCC GCACATGAGC GTGGCGCAGA ACATCGCCTT CGGCCTCAAG
CAGGACGGCC TGCCCAAGGC CGAGATCGAC GAGCGCGTGG CCGAGATGCT CAAGCTGGTG
CACATGACCC AGTACGCCAA GCGCAAGCCG CACCAGCTCT CCGGCGGCCA GCGCCAGCGG
GTGGCCCTGG CCCGTTCGCT GGCCAAGCGG CCGAAGCTGC TGCTGCTCGA CGAGCCGATG
GGCGCGCTGG ACAAGAAGCT GCGCTCGCAG ATGCAACTGG AACTGGTGGA GATCATCGAG
CGCGTCGGCG TGACCTGCGT GATGGTGACC CACGACCAGG AAGAGGCCAT GACCATGGCC
CAGCGCATCG CCATCATGCA CCTGGGCTGC ATCGAGCAGA TCGGCAGCCC GATGGACATC
TACGAGACCC CGGCGAGCCG CCTGGTCTGC GAGTTCATCG GCAACGTCAA CCTGTTCGAC
GGCGTGCTGG TGGAGGACGT GCAGGACCAT GCGGTGATCG CCTGCCCGCA GCTGGAGAAC
CCGATCTACA TCGGCCACGG CATCAGCACC CGCGCCGAGG ACAAGCGCAT CACCTACGCG
CTGCGGCCGG AGAAAGTGAT GATCAGCGCG CAGAAGCCGG ACAACCTGGA ACACGCCGGG
CACAACTGGG CCCAGGGCAC CGTCTACGAC ATCGCCTACC TTGGCGGCCA CTCGGTGTAC
TACATCAAGC TGGCCTCCGG GATGATCGTC CAGGCCTTCA TGGCCAACGC CGAGCGCCAC
GTCGCCCGGC CGACCTGGGA CCAGTCGGTG TACATCAGCT GGTACGACGA CAGCGGCGTG
GTACTGCAGT CATGA
 
Protein sequence
MAIASGAYKK ALEGNQQPKE VLVKIDRVTK QFDETLAVDT VSLTINKGEI FALLGGSGSG 
KSTLLRMLAG FERPTEGRIF LDGQDITDLP PYERPINMMF QSYALFPHMS VAQNIAFGLK
QDGLPKAEID ERVAEMLKLV HMTQYAKRKP HQLSGGQRQR VALARSLAKR PKLLLLDEPM
GALDKKLRSQ MQLELVEIIE RVGVTCVMVT HDQEEAMTMA QRIAIMHLGC IEQIGSPMDI
YETPASRLVC EFIGNVNLFD GVLVEDVQDH AVIACPQLEN PIYIGHGIST RAEDKRITYA
LRPEKVMISA QKPDNLEHAG HNWAQGTVYD IAYLGGHSVY YIKLASGMIV QAFMANAERH
VARPTWDQSV YISWYDDSGV VLQS