| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_03790 |
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| Symbol | |
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| ID | 4383695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 339852 |
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| End bp | 340823 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639322859 |
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| Product | sensory box GGDEF domain-containing protein |
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| Protein accession | YP_788459 |
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| Protein GI | 116054017 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.228486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACC TACCCGGCAT TCCCGAAGAC CCGCAGGAGG CCGCGCTGGC CTTGCTGCAC
AGCCGTGCCG AAGTGGCCCG GCTGAAGGAG CGCGAGCAAC TCTTCAGCGC CTTGCTGGCC
AGCGTCAACT CGGTGCTCTG GGCCTACGAC TGGCAGAACC GGCGGATGGT CTACGTCAGC
CCCGCCTACG AGAAAATCTT CGGCCGTTCC GCGGCGCTGC TGCTGGCGGA CTACGAGGAG
TGGCGCAACA GCATCTACCC GGACGACCTC GACTACGCCG ACAGCAGCCT GCTGCAGGTG
CTCGAACGTG GCGCCGTGGA ACAACGCGAA TACCGCATCG TGCGCGGCGA CGGCGAGGTC
CGCTGGCTCA ACGACAAGTG CTTCGTCAGT CGCCAGGGCG AGGCGGGACT GCCGCTGATG
GTGGTGGGCA TCGCCGAGGA CATCACCGAC AAGAAGCACA TGGAGAGCGA GCTGCAACGG
TTGGCCACCA CCGACGTGCT GACCCAGAGC AGCAACCGTC GCTATTTCTT CGACAGTGCC
GAGGCGGCCT TCAAGGAGTG TCGCCGCGAG GGGATACCGT TGGCGTTCCT GCTGCTGGAC
GTCGATGACT TCAAGAAGAT CAACGACCGC TTCGGCCACC AGGTCGGCGA CCAGGTCCTC
CAGCGTATCG CCCAGAGCGG CAGTGCCGCG TTGCGCCGTG GCGACCTGTT CGGGCGGATC
GGCGGCGAGG AGTTCGCCGT GCTGCTGCCC GGCTGCGACG AGCAGACCGC GCGACAGATC
GGCGAACGCC TGCAGCGCGA GGTGCAACGC CTGCGCTTCC AGGAGGGCGA ACAAAGCTTC
GGGATCACCG TCAGCCAGGG CCTGACGGTC CTCCAGGCTG ATGACGAGGG GCTCGGTGCC
CTCTACAGCC GGGCCGACGC CGCGATGTAC TCGGCCAAGC GCCAGGGCAA GGACTGCATC
GTCGTGGGCT GA
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| Protein sequence | MDDLPGIPED PQEAALALLH SRAEVARLKE REQLFSALLA SVNSVLWAYD WQNRRMVYVS
PAYEKIFGRS AALLLADYEE WRNSIYPDDL DYADSSLLQV LERGAVEQRE YRIVRGDGEV
RWLNDKCFVS RQGEAGLPLM VVGIAEDITD KKHMESELQR LATTDVLTQS SNRRYFFDSA
EAAFKECRRE GIPLAFLLLD VDDFKKINDR FGHQVGDQVL QRIAQSGSAA LRRGDLFGRI
GGEEFAVLLP GCDEQTARQI GERLQREVQR LRFQEGEQSF GITVSQGLTV LQADDEGLGA
LYSRADAAMY SAKRQGKDCI VVG
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