Gene PA14_03760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_03760 
Symbol 
ID4383692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp336327 
End bp337712 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content68% 
IMG OID639322856 
Productputative sodium:solute symporter 
Protein accessionYP_788456 
Protein GI116054014 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.188515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0159939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGG ATTACCTGAT CATGCTGGTC TACGCCCTGG CCATGCTGGG CCTGGGCTGG 
TACGGAATGC GCAAGGCGAA GAGCCAGAGC GATTTCCTCG TCGCCGGACG CCGCCTCGGC
CCCGGCCTCT ACCTGGGAAC CATGGCCGCG GTGGTGCTCG GCGGCGCGTC GACCATCGGT
ACGGTCAAGC TCGGCTACCA GTTCGGCCTG TCCGGCTTGT GGCTGGTGTT CATGCTCGGC
CTGGGGATCA TCGTCCTCAG CCTGGTGTTC TCGCGGCAGA TCGCGCGCCT GCGGGTGTTC
ACCGTGACCC AGGTGCTGGA GCAGCGCTAC CAGGCCTCCT CGCGCCTGAT CGGCGGGGTG
GTCATGGTCG CCTACGACCT GATGGTGGCG GTCACCGCGA CCATCGCCAT CGGCTCGGTC
ACCGAGGTGG TATTCGGCAT CCCGCGGATC CCGGCGATCC TCTGCGGTGG CGGGATCGTC
ATCGTCTATT CGGTGATCGG CGGCATGTGG TCCCTTACGC TGACCGACAT CATCCAGTTC
GTGATCAAGA CCGTCGGTAT CTTCCTGGTC CTGCTGCCGT TGTCGATCGA CGGCGCCGGT
GGCCTGGCGC GCATGCAGGA GGTGCTGCCG GCGGGCTTCT TCGACCTCGG CCACATCGGC
CTGGATACCA TCCTCACCTA CTTCCTCCTG TACTTCTTCG GCGCGCTGAT CGGCCAGGAC
ATCTGGCAGC GAGTGTTCAC CGCGCGCAGC GAGACGGTGG TGCGCTATGC CGGGCTTGGT
GCCGGCGTCT ACTGCATGCT CTACGGCGCC GCCTGCGCGC TGATCGGCGC GGCGGCGCGG
GTCCTCCTGC CGGACCTGGC GGTGCCGGAG AACGCCTACG CCGAGATCAC CCGCGAGGTA
CTGGCGCCGG GCCTGCGCGG CCTGGTGGTG GCGGCCGCGC TGTCGGCGAT CATGTCCACC
GCCAGCGGGT GCCTGCTGGC GGCGGCCACC GTGCTGCAGG AAGACATCTA TGCGCGCTTC
CTGCGCCCCG GTACCACCAG CGACATCCGC CTGAGCCGTT GCATCACCCT GCTGATGGGG
GTGGCGATGC TGGTCCTGGC GTGCCTGGTC AACGACGTCA TCGCGGCCCT GAGCATCGCC
TACAACCTGC TGGTCGGCGG CCTGCTGGTG CCGATCGTCG GCGCGCTGCT GTGGCGTCGG
GCCAGTCCGC AGGGAGCGAT CGCCAGCATC GTCGCCGGTT GCCTGGCGGT GATCGCCTGC
ATGGCCCGCG ACGGCCTGCT CGCCAACTCG CCGATCGTCT ACGGCCTGCT GGCCAGCCTG
GCGACCTTCG TCGCGGTCAG CCTGGCCACC CGTCCTGCCG CCAGCCTGCG AGCCCAGCCG
GAATGA
 
Protein sequence
MLLDYLIMLV YALAMLGLGW YGMRKAKSQS DFLVAGRRLG PGLYLGTMAA VVLGGASTIG 
TVKLGYQFGL SGLWLVFMLG LGIIVLSLVF SRQIARLRVF TVTQVLEQRY QASSRLIGGV
VMVAYDLMVA VTATIAIGSV TEVVFGIPRI PAILCGGGIV IVYSVIGGMW SLTLTDIIQF
VIKTVGIFLV LLPLSIDGAG GLARMQEVLP AGFFDLGHIG LDTILTYFLL YFFGALIGQD
IWQRVFTARS ETVVRYAGLG AGVYCMLYGA ACALIGAAAR VLLPDLAVPE NAYAEITREV
LAPGLRGLVV AAALSAIMST ASGCLLAAAT VLQEDIYARF LRPGTTSDIR LSRCITLLMG
VAMLVLACLV NDVIAALSIA YNLLVGGLLV PIVGALLWRR ASPQGAIASI VAGCLAVIAC
MARDGLLANS PIVYGLLASL ATFVAVSLAT RPAASLRAQP E