| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_03720 |
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| Symbol | |
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| ID | 4383690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 332467 |
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| End bp | 334749 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639322854 |
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| Product | sensory box GGDEF domain-containing protein |
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| Protein accession | YP_788454 |
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| Protein GI | 116054012 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000164821 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCCCC GCCTGAGTGC CCTTCGCCTG AGCCTGGCTT ATCTCGCAAT CGCCATCGCC
TGGGCGTTCC TGAGCGATCA TTTGTTACAA AACCAGGTCC AGGACCACGA CCAGCTGGTG
TTCTGGATGA CCGCCAAGCG GCTGTTCTTC TTCGCCGCAA CCGGCCTGCT CCTGTACCTC
TACCTGGTAC GCCAATTCCG CCGCAAGGCC CAGGCCTACG ACGAACTGCA CGGCAGCGAG
CAGCGCCTGA ACCGTGCCCT GGAAGCGGTG CGCGACGGTC TCTGGGATTG GGACCTGGTG
ACCGACCGGA TGTTCGTCTC GCCGGGCTAC GCCGCGCTGA TCGGCCTCGC TCCGGAGGAA
CTCGGCGACC CCATCGAGAC CTGGAAGAAG CGCCTGCACC CGGAAGAGTA CGCCACCGTG
CTGGAGGCCC ACCGCAACCA CCTGCAGGGC CTGACCGACA ATCTCGACCA CATCTACCGC
CTGCGCCACA AGGACGGCGA CTACCGCTGG ATCCACTCGC GCGGCCGGGT CCTCCGCGAT
GCCCTGGGCA AGCCGCTGCA CTACACCGGC GTGGCCCGCG ACATCACCCT GCAGCGGCTC
AAGGAAGACC ACCTGCGCCA GGCCGCGGCG GTATTCGACA GCACCCGCGA GGGCGTTCTG
GTCACCGATG CCCAGGCGGT GATCGTGCAC GTCAACCCTT CCTTCGAGCG CATCACCGGC
TACCGTTCCG AGGACGTGCT CGGCAAGACC CCGGCGATCC TCCGCTCCGG TCGCCAGGAC
CAGGCGTTCT ACCAGCGCCT GTGGCTGGCC CTGCGCGAGC AGGACGTCTG GAGCGGAGAG
ATCTGGAACC GTCGCAAGAG CGGCGAGATC TACCCGCAGT GGCTGCACAT CCGCGCGGTG
CGCAACGACC AGGGCCAACT GACCCACTAC GTCGGGGTGT TCTCCGACCT GAGCAGCATC
AAGCGCTCGG AGAACGAACT GGACTTCCTC GCCCACCACG ACTCGCTGAC CGGCCTGCCC
AACCGCGTGC TGCTGCGCGA GCGCATCGAG CAGGCGCTGG AGAACGGCAA GGACCGGACG
GTGGCCGGGG CCCTGCTGCT GATCGACCTC GACCACTTCA AGCACATCAA CGACAGCCTC
GGCCACACCA CCGGCGACAT GCTCCTCAAG GAAGTCAGCA AGCGCCTGCA ACACCAGCTC
GACGAGCGCT GCCTGCTGTC GCGACTGGGC GGCGACGAAT TCGCCATCCT CGTCGAGAAC
GACGACCCGG AAGCCGTCGC GCGACTCTCA CAGCGCATCC TCGACGGTTT CAACGCGCCG
TTCGACATCC ACTGCCAGCC GATCTATATC AGCGCCAGCC TCGGTGTCAG CCTCTACCCG
GAAGACGCCA GCGACGTCGA CCACCTGATG CAACACGCCG ACGCCGCGCT GTTCCAGGCC
AAGGACAGCG GGCGTAACGC CTACGCCTTC TACACCCGCG TGCTGACCGC CCGGGCCCGC
GCCCATGTCC AGGTGGAATC GGCCCTGCGC CATGCGCTGG AGCACGACGA ACTGCGCGTC
CACTACCAGC CGGTGCACGA CCTGGCCAGC GGGCGGATCG TCGGCGTCGA GTCGCTGGTG
CGCTGGCAGC ATCCCGAGCG CGGCCTGGTG CCGCCAGGCG AGTTCGTCCC GGTGGCGGAG
GAATGCGGGC TGATCGCCGC GCTGGACAAT TGGGTGCTCA AGCGTGCCTG CCGGCAGATG
CGCGAATGGC AACAGCGCGG CGTCGAACTG GAGTTCGTCG CGGTCAACGT CTCCAGTCGG
CTGTTCAACC GCGGCGGCCT AGAGGAAAGG ATCGCCAACG CCCTGGAAGA GTCCGGGCTG
GAGCCCCGCT ACCTGGAGCT GGAAGTCACC GAAAGCGCGG TGATGGAGGA CTTCGAGCAG
TCCCTCAACC TGCTCTGCCG CCTGCGCATC CTCGGCGTGA ACCTGGCCAT CGACGACTTC
GGCACCGGCT ATTCCTCGCT GATGCGCCTC AAGCGGCTGC CGGTACACAA GCTGAAGATC
GACCAGGGCT TCGTCGCCGG CCTGCCCGGC GCGGTGGACG ACGCCGCGAT CGCCCGTGCG
ATAGTTGCCC TGGCGCAAAG CATGGGCCTG CGGGTGGTTG CCGAGGGTAT CGAGCACCAG
GACCAGGCGC TGTTCCTGCG CGAACATGGC TGCGACTTCG GCCAAGGCTA CTGGTACGGA
CGGCCGCAAC CGGCGGAAGC GCTGCGCTTC GACCTGCCGC CCGTGGCGTT GCCGGAAGAC
TGA
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| Protein sequence | MSPRLSALRL SLAYLAIAIA WAFLSDHLLQ NQVQDHDQLV FWMTAKRLFF FAATGLLLYL
YLVRQFRRKA QAYDELHGSE QRLNRALEAV RDGLWDWDLV TDRMFVSPGY AALIGLAPEE
LGDPIETWKK RLHPEEYATV LEAHRNHLQG LTDNLDHIYR LRHKDGDYRW IHSRGRVLRD
ALGKPLHYTG VARDITLQRL KEDHLRQAAA VFDSTREGVL VTDAQAVIVH VNPSFERITG
YRSEDVLGKT PAILRSGRQD QAFYQRLWLA LREQDVWSGE IWNRRKSGEI YPQWLHIRAV
RNDQGQLTHY VGVFSDLSSI KRSENELDFL AHHDSLTGLP NRVLLRERIE QALENGKDRT
VAGALLLIDL DHFKHINDSL GHTTGDMLLK EVSKRLQHQL DERCLLSRLG GDEFAILVEN
DDPEAVARLS QRILDGFNAP FDIHCQPIYI SASLGVSLYP EDASDVDHLM QHADAALFQA
KDSGRNAYAF YTRVLTARAR AHVQVESALR HALEHDELRV HYQPVHDLAS GRIVGVESLV
RWQHPERGLV PPGEFVPVAE ECGLIAALDN WVLKRACRQM REWQQRGVEL EFVAVNVSSR
LFNRGGLEER IANALEESGL EPRYLELEVT ESAVMEDFEQ SLNLLCRLRI LGVNLAIDDF
GTGYSSLMRL KRLPVHKLKI DQGFVAGLPG AVDDAAIARA IVALAQSMGL RVVAEGIEHQ
DQALFLREHG CDFGQGYWYG RPQPAEALRF DLPPVALPED
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