| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_03430 |
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| Symbol | gabD |
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| ID | 4384324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 313663 |
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| End bp | 315114 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639322834 |
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| Product | succinate-semialdehyde dehydrogenase I |
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| Protein accession | YP_788434 |
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| Protein GI | 116053992 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.59013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 1.44142e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACTCA AAGATGCCAA GCTGTTCCGT CAACAAGCCT ACGTCGATGG CGCCTGGGTG
GATGCCGACA ACGGCCAGAC CATCAAGGTG AACAACCCGG CCACCGGCGA GATCATCGGC
AGCGTGCCGA AGATGGGCGC CGCCGAGACC CGCCGCGCCA TCGAGGCTGC CGACAAGGCC
CTGCCGGCCT GGCGTGCGCT GACCGCCAAG GAGCGCGCCA ACAAGCTGCG CCGCTGGTTC
GACCTGATGA TCGAGAACCA GGACGACCTG GCCCGCCTGA TGACCATCGA GCAGGGCAAG
CCGCTGGCCG AGGCCAAGGG CGAGATCGCC TACGCCGCCT CCTTCCTCGA ATGGTTCGGC
GAAGAAGCCA AGCGCATCTA CGGCGACACC ATTCCCGGCC ACCAGCCGGA CAAGCGCATC
ATCGTGATCA AGCAGCCGAT CGGTGTGACC GCGGCCATCA CGCCGTGGAA CTTCCCCTCG
GCGATGATCA CCCGCAAGGC CGGCCCGGCC CTGGCCGCCG GCTGCACCAT GGTGCTCAAG
CCTGCTTCGC AGACCCCGTA TTCCGCCCTG GCCCTGGCCG AGCTGGCAGA GCGCGCCGGC
ATTCCGAAGG GCGTGTTCAG CGTGGTCACC GGTAGCGCCG GCGAAGTCGG CGGCGAGCTG
ACCAGCAACC CGATCGTGCG CAAGCTGACC TTCACCGGTT CCACCGAAAT CGGCCGCCAA
CTGATGGCCG AGTGCGCCCA GGACATCAAG AAGGTGTCCC TGGAGCTGGG CGGCAACGCG
CCGTTCATCG TGTTCGACGA CGCCGACCTG GACGCCGCCG TCGAGGGCGC GCTGATTTCC
AAGTACCGCA ACAACGGCCA GACCTGCGTC TGCGCCAACC GCCTGTACGT GCAGGACGGC
GTGTACGACG CCTTCGTCGA CAAGCTGAAG GCCGCCGTGG CCAAGCTGAA CATCGGCAAC
GGCCTGGAAG CCGGCGTGAC CACCGGTCCG CTGATCGACG CCAAGGCCGT GACCAAGGTC
GAGGAACACA TCGCCGACGC GGTCTCCAAG GGCGCCAAGG TGGTTTCCGG CGGCAAGCCG
CACGCCCTCG GCGGCACCTT CTTCGAGCCG ACCATCCTGG TCGACGTGCC GAAGAACGCC
CTGGTGTCCA AGGACGAGAC CTTCGGCCCG CTGGCGCCGG TGTTCCGCTT CAAGGACGAG
GCCGAGGTCA TCGCCATGTC CAACGACACC GAGTTCGGCC TGGCGTCCTA CTTCTACGCC
CGCGACCTGG CCCGCGTGTT CCGCGTCGCC GAGCAACTGG AGTACGGCAT GGTCGGCATC
AACACCGGCC TGATCTCCAA CGAAGTGGCG CCGTTCGGCG GCATCAAGGC CTCGGGCCTG
GGCCGCGAAG GCTCCAAGTA CGGGATCGAG GACTACCTCG AGATCAAGTA CCTCTGCCTG
GGCGGTATCT GA
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| Protein sequence | MQLKDAKLFR QQAYVDGAWV DADNGQTIKV NNPATGEIIG SVPKMGAAET RRAIEAADKA
LPAWRALTAK ERANKLRRWF DLMIENQDDL ARLMTIEQGK PLAEAKGEIA YAASFLEWFG
EEAKRIYGDT IPGHQPDKRI IVIKQPIGVT AAITPWNFPS AMITRKAGPA LAAGCTMVLK
PASQTPYSAL ALAELAERAG IPKGVFSVVT GSAGEVGGEL TSNPIVRKLT FTGSTEIGRQ
LMAECAQDIK KVSLELGGNA PFIVFDDADL DAAVEGALIS KYRNNGQTCV CANRLYVQDG
VYDAFVDKLK AAVAKLNIGN GLEAGVTTGP LIDAKAVTKV EEHIADAVSK GAKVVSGGKP
HALGGTFFEP TILVDVPKNA LVSKDETFGP LAPVFRFKDE AEVIAMSNDT EFGLASYFYA
RDLARVFRVA EQLEYGMVGI NTGLISNEVA PFGGIKASGL GREGSKYGIE DYLEIKYLCL
GGI
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