| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_03220 |
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| Symbol | |
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| ID | 4383673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 285213 |
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| End bp | 288272 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639322814 |
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| Product | hypothetical protein |
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| Protein accession | YP_788415 |
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| Protein GI | 116053975 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000000000195826 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTCAAA GGGACCTGAA ATTCACCTTC GTCGTCGGCG AAGGGAAACT CGCGTTCGAT
GTCGTCGAGT TCGAACTGGA AGAAGCGCTC TGCGAGCCTT TCCGCCTGAA CCTGAAGCTG
GCCAGCGACA AGAACGCCAT CGATTTCAAG CAGGTACTCG ACCAGCCGGG CACCTTCACC
CTCTGGCAGG ACGGCCGTCC GGCCCGCTAC GTCCATGGCA TCGTCAGCCA CTTCACCCAG
GGCAGCTCGG GTTTTCGCCG GACCCGCTAC GAACTGCTGC TGGAACCGCA GTTGGCGCGC
CTGGAGCTGT GCTGCAACTG GCGGATCTTC CAGGAGAAGA GTGTTCCGGA GATTCTCCAG
GCGCTGCTCA AGGAACACCG GGTGCTCGAC TACGAACAGC GCATCTACCA TGAGCACCTG
CCGCGCGAAT ACTGCGTGCA GGCCGGCGAC AGCGATCACT ACCTGCACGA CCGGCTGGCT
TTCGAGGAAG GCCTGGTCTA CTACTTCCGC TTCGACGAAC ACCGCCACAC CCTGGTCTGC
AGCGACCGGC TCTACGTCCA GGAGCGTATC GCCGGCGGCC CGGTACTGTT CAGCGCCCAG
CCGGAGGGCG ACAACCCGCA GCCGGTGCTT CATTCCTTCC GCTACAGCGA AAATGTTCGT
ACGGCTCGAC AGACCCAGCG GGACTACAGC TTCAAGCGCC CGACCTACGA CCAGGAGCAT
CATCTCGCTG GCGAGGCGCT CGAGCATCAG GACTCGTCCT ACGAGCGCTA CGACTACCCC
GGTCGCTACA AGCAGAGCGG CGCGGGCCGG CCTTTCAGCG AAAGCCGCCT CAGAGGACAT
CGGCGCGATG CACGGGTGGC ATCGGTCAGC GGCGACGACC CGCGGCTGAT CCCGGGCCAC
GCCTTTGCCC TGGAAGGTCA TCCGCGTGCC GACTTCAACG CCTGGTGGCG GCCGGTGCGG
GTGGTCCATC GCGGCACCCA GTATGCCGGC CAGGAGGAAG AGTCCGCCGA CGCCCCTCTG
GGGGTGAGCT ACGACCTGCG CGCCGAACTG GTGCCCGAGG ACGTCGAATG GCGTCCCGCA
CCGCTGCCTC GGCCGCGTAT CGATGGTCCG CAGATCGCGA CGGTAGTCGG CCCGGCAGGG
GAAGAGATCC ATTGCGACGA GTGGGGGCGG GTGAAAGTCC AGTTCCCCTG GGATCGCGAG
GGACGTCACG ATGAGTTCAG TACCTGCTGG ATACGGGTCG CGCAGAACTG GGCGGGTGCC
GACTGGGGAA ACATGGCGAT CCCGCGGATT GGCCAGGAGG TGATCGTCGA TTACCTGGAC
GGCGACTGCG ACCAGCCGAT CGTCACCGGG CGCACCTACC GGGCGACCAA CCGACCACCC
TACGCGCTGC CCGACCACAA GATCCTCAGC ACCATCAAGA GCAAGGAGTA CAAGGGCAGT
CGGGCCAACG AGCTGCGCAT CGACGACACC ACGGCGCAGA TCAGTGCGGC GCTGATGAGC
GACCACGGTG CCAGCGCGCT GCACCTGGGC TACCTGACCC ATCCTCGGCC CGAAGGCGGC
AAGCCGCGCG GCGAGGGCTT CGAACTGCGC ACCGACGAAC ATGGCGCGGT GCGTGCGGCC
AGGGGCCTGC TGCTGAGCAC CGAGGAGCAG CTCAGGGCCG GCGCCGGCCA TCTCGACCGA
GGCGTCGTGG TGCAGGTGCT GGAGGCGGCG CTGGAGCTGG CCCGCGAGCT GGGCGACTAC
GCCGGGGAGC ACCAGGGCGT GGGGCACGAC GCGGCGCCGC AGCAAACCCT CCAGGAAGCC
GTGCGCGACC TCGGCCACGG TGCCAACGAC GAGTCCGGCA AGAGCAACGG AGGCAAGCCA
GCGATCGCCT TGAGCGGTCC GGCAGGGATC GCCGCGGCGA CGCCGACGAG CCTGACCCTG
GCCGCCGGCG AGCACGTCGA CAGCGTGGCC CGGCAGAACC AGCAGGTGAC CGCCGGGCAG
AAGGTGGTGA TCAACGCCGG CAGCGACATC GGCCTGTTCG CCCAGGGCGG CGAGCTGCGC
CAGATCACCC ACCAGGGGCC GATGCTGCTG CAGGCGCAGA AGAACGACAT CCGCCTGGAG
GCCGAGCAGA GCGTGGAGGT CAGCGCCAGC CAGCAGCACG TGCTGGTCAC CGCGAAGGAG
CACATCACCC TGATGTGCGG CGGCGCCTAC CTGACCCTCA AGGGCGGCAA CATCGAGCTG
GGCATGCCCG GCAACTTCGT GGTCAAGGCG GCGAAGCACA GTCATGTCGG CGCGGCCAGC
CTGGAAGCCG AGCTGCCGCA GTTCGAGGTG GGCGAGACGC AGCGGCGGTT CGTCCTCAAG
CAACTGGACG GGCAGACGGC CATGCCCAAC GTGCCCTATA CCATCACCAT GGCCAACGGC
GAGGTCATCG AGGGCGTCAC CGACGCCGAA GGCGCCACCC AGCTGCTGCA GAAGGATGCG
ATGAACATCG CCAAGGTCGA TATGAAACAC ACGAGATCGC CCGCCTCCGC AGTTGCCGGG
ATAGCAGCGG CGGTTGGCGC GGCGGTTGCA GTCGGCAAGC TCCTGAGTGG CCCCGACGCC
GAGGCCGGAC GTGCTCTCAG CGAAGGGGAA ATCAGCCTGG CGAAAGACGT ATTCGGCGAC
TCCATCGACT ATTCCACGGT CCGCCTGCGC GACGAGGACT ATGTCCCCTG GCAGGGCAAG
GACTACGTGA TGGCGCCGAA CGGCCACATC TACTTCGGCG AGGAGTTGCG CGGCGTGGCG
GACTGGAGCC TGGAGAGCCT GCAGCGCCAG GGCCTGTTCA TCCACGAAAT GACCCATGTC
TGGCAGCACC AGCATGGCGT CAACGTCCTT CTGGTGGGGG CCTACCAGCA AGCCAGGCAG
TTTCTCCTAG GCGACCAGTA CGCCTACCGG TTGGAGCCGG GAAAGACGTT GAAGGACTAC
AACATCGAAC AGCAGGGAGA CATCGTTCGA GATTATTTCC TCGAGAAGAA CGAGTTCGGG
GAAGCCTCTG CGAACAGCAG GTTCGCTGGC GTACTGAAAA ACTTCCCAAC GGGATACTGA
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| Protein sequence | MRQRDLKFTF VVGEGKLAFD VVEFELEEAL CEPFRLNLKL ASDKNAIDFK QVLDQPGTFT
LWQDGRPARY VHGIVSHFTQ GSSGFRRTRY ELLLEPQLAR LELCCNWRIF QEKSVPEILQ
ALLKEHRVLD YEQRIYHEHL PREYCVQAGD SDHYLHDRLA FEEGLVYYFR FDEHRHTLVC
SDRLYVQERI AGGPVLFSAQ PEGDNPQPVL HSFRYSENVR TARQTQRDYS FKRPTYDQEH
HLAGEALEHQ DSSYERYDYP GRYKQSGAGR PFSESRLRGH RRDARVASVS GDDPRLIPGH
AFALEGHPRA DFNAWWRPVR VVHRGTQYAG QEEESADAPL GVSYDLRAEL VPEDVEWRPA
PLPRPRIDGP QIATVVGPAG EEIHCDEWGR VKVQFPWDRE GRHDEFSTCW IRVAQNWAGA
DWGNMAIPRI GQEVIVDYLD GDCDQPIVTG RTYRATNRPP YALPDHKILS TIKSKEYKGS
RANELRIDDT TAQISAALMS DHGASALHLG YLTHPRPEGG KPRGEGFELR TDEHGAVRAA
RGLLLSTEEQ LRAGAGHLDR GVVVQVLEAA LELARELGDY AGEHQGVGHD AAPQQTLQEA
VRDLGHGAND ESGKSNGGKP AIALSGPAGI AAATPTSLTL AAGEHVDSVA RQNQQVTAGQ
KVVINAGSDI GLFAQGGELR QITHQGPMLL QAQKNDIRLE AEQSVEVSAS QQHVLVTAKE
HITLMCGGAY LTLKGGNIEL GMPGNFVVKA AKHSHVGAAS LEAELPQFEV GETQRRFVLK
QLDGQTAMPN VPYTITMANG EVIEGVTDAE GATQLLQKDA MNIAKVDMKH TRSPASAVAG
IAAAVGAAVA VGKLLSGPDA EAGRALSEGE ISLAKDVFGD SIDYSTVRLR DEDYVPWQGK
DYVMAPNGHI YFGEELRGVA DWSLESLQRQ GLFIHEMTHV WQHQHGVNVL LVGAYQQARQ
FLLGDQYAYR LEPGKTLKDY NIEQQGDIVR DYFLEKNEFG EASANSRFAG VLKNFPTGY
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