Gene PA14_03163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_03163 
Symbol 
ID4384031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand+ 
Start bp278510 
End bp279133 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content55% 
IMG OID639322807 
Producthypothetical protein 
Protein accessionYP_788408 
Protein GI116054432 
COG category[S] Function unknown 
COG ID[COG3600] Uncharacterized phage-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0000000414994 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000000322947 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGCAGCC CCATAATCCG CCACCATTTG CTACACCGCC TAAGGGATAG GCAAGAGAGG 
TTTGACGTGA TCTTCAGTGA ACAGAAAGTG GCTCACATGG CAGCTTTCTT TTTGGCGAGT 
GCCGAAGGGC CGCTGCCTCA TCTCACGCTG ATCAAACTGC TGTACCTGGC AGACCGAGAG 
TCGATGGCTC GTTTCGACGT TCCCATGTCG GACGATCGAG CTGTTTCCAT GCCCCATGGG 
CCTGTCCTTT CCTCGACGCT AGACCTCATC AAGGGGCGTT TGCGCTCTGA GGTTTGGAGC 
GCTTGGATTT CTCCGTTGGT GGATCACGAG GTCCGTCTGG TCCATGACGT GGAGAATTGG 
GACGATCTGG ATGAGTTGAG CCGATCGGAT CGCAGCATTT TGGAATCGGT CTGGCAAGAG 
TTTGGCCACA TGACCAAGTA CCAATTGCGG GACTACACCC ACCATCACAT TGGTGAGTGG 
CACGACCCCC ACGGCTCTTC CAGGGACATT GATCCAAAGG ATACTTTCAT GGCGCTTGGT 
CAAAGCGAGG AGCTGGCGGA GATCAAGGCG CGCGATCTTG CTGAGCGCCG TCGGCACGGT 
AGGAAGCTGT CTGAGTTCAT TTGA
 
Protein sequence
MSSPIIRHHL LHRLRDRQER FDVIFSEQKV AHMAAFFLAS AEGPLPHLTL IKLLYLADRE 
SMARFDVPMS DDRAVSMPHG PVLSSTLDLI KGRLRSEVWS AWISPLVDHE VRLVHDVENW 
DDLDELSRSD RSILESVWQE FGHMTKYQLR DYTHHHIGEW HDPHGSSRDI DPKDTFMALG 
QSEELAEIKA RDLAERRRHG RKLSEFI