| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_02970 |
|---|
| Symbol | |
|---|
| ID | 4383650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 259470 |
|---|
| End bp | 260348 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639322789 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_788390 |
|---|
| Protein GI | 116053952 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.000670946 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT CCACCTCCCC GCTGCCCGCC AGCGACCAGA CCCTGCGCGG CATCCTGCTG
ATCTGTGCCG CGGTGTTCCT GTTCGCCAGC CACGACGGGT TGTCCAAGTT CCTTTCCGGT
TTCTACCCGA TCGTCATGGT GGTCTGGGCC CGCTACCTGG TGCACACCCT GCTGATGGTC
GCCGTGTTCG TGCCGCGCAA CGGCCTCGCG GTGATCCGCA CCCGCCGTCC GCTCATGCAG
TTGGCGCGGG CGCTGTGCCT GATCGGCACC AGCCTGTTCT TCACCACCGG CCTGCGCTAC
CTGCCCTTGG CCGAGGCGAC CGCGGTGAAC TTCCTGGCGC CGCTGCTGGT GACCGCGTTA
TCCGTGCCGT TACTGAAGGA GAAGGTCAGC CTCGGTCAAT GGCTGGCGGT GCTCACCGGC
TTCATCGGCG TGCTCTTCAT CGTGCGTCCC GGTGGCGCGC TGTTCACCCC GGCGGCGTTG
TTCCCGCTCG GCTCGGCGCT GTGCTTCGGG CTCTACCAGC TGCTCACGCG GATGCTCGCC
AACAGCGACA GCCCGACCAC CAGCAACTTC CTCGCCGGCA TCTTCAACAC GCTCATCATG
AGCCTGCTGG TGCCGTTCTT CTGGCAGACC CCAAGTCTTC TCCACGGCCT GATGATGATC
GCCCTGGGCG GTTGCGGCAT GGGCGGCCAC CTGCTGCTGA CCCAGGCCTT CCGCCATGCG
CCGCCGGCGA CCCTGGCGCC GTTCAGCTAT GGCCAGATCA TCTTCGCCGG CCTGCTCGGC
CTGCTGGTGT TCGGCCACGT GCCGGACGCC TGGGCGCTGC TCGGCATCCT CGTCATCTGC
GCCAGCGGCC TGGTGGTCGC CTGGCGCCGT GGCCGCTGA
|
|---|
| Protein sequence | MNASTSPLPA SDQTLRGILL ICAAVFLFAS HDGLSKFLSG FYPIVMVVWA RYLVHTLLMV
AVFVPRNGLA VIRTRRPLMQ LARALCLIGT SLFFTTGLRY LPLAEATAVN FLAPLLVTAL
SVPLLKEKVS LGQWLAVLTG FIGVLFIVRP GGALFTPAAL FPLGSALCFG LYQLLTRMLA
NSDSPTTSNF LAGIFNTLIM SLLVPFFWQT PSLLHGLMMI ALGGCGMGGH LLLTQAFRHA
PPATLAPFSY GQIIFAGLLG LLVFGHVPDA WALLGILVIC ASGLVVAWRR GR
|
|---|
| |