Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_02960 |
Symbol | |
ID | 4383649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 258505 |
End bp | 259320 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639322788 |
Product | hypothetical protein |
Protein accession | YP_788389 |
Protein GI | 116053951 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000610778 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAATCGA GGATTCTTTC CCTGGCGGCG CTCACCGTGC TCGAGCTGTC GCCCCCGGAC ATGGTCGAGG CTGCCGCCCG TGCCGGCTAC AGTCATGTCG GCCTGCGCCT GGTGCCGGCC ACCGTGGAAG AGCACCACTA TCCGCTGCTG GCCGATGCCG GCCTGCGCCG GCGGACCCTG GCGCGGCTGC GCGACAGCGG AGTGCGCACG CTGGACGTGG AGATCCTGCG CCTGCGTCCG GACACCCGCG TCGGCGAGTT CGCCGCGGTG CTGGAGGTCG GCGCCGAGTT CGGCGCGCGC TATGTGCTGG TGGCCGGCAA CGATGACGAC GAGCGGCGCA GCGCGGACAA TTTCGCCGCG TTGTGCGACC TGGCGCGGCC GCTCGGCCTC GATCCGCACC TGGAGTTCAT GCCCTGGACC GGGATCCGCG ACCTGCGGCA GGCCGCACGG GTGGTCGAGG CGGCGGCGCG GGACAACGCC GGCCTGTTGC TGGACGCCTT CCATTTCGAC CGCTCGGCCA GCAGCCTGGA AGACCTGCGG GCGATCCCGC CTGCGCGCCT GGGCTACGCG CAACTCTGCG ATGTCGTCGG GCCGCGTCCG ACGTCGATGG ACGAAATCCT TCGCCAGGCC CGCGAGGAAC GGCGTTTCCC TGGCGATGGC GGGCTCGATC TGCTGGCGCT GCTGCGCGCC TTGCCGGAGA ACCTGCCGCT GAGCCTGGAG GTGCCCGCGC TGGATCTGCT CGCGCGCGGC GTGGATGGCG CGGAGCGGGC GCGGCTGGCG ATCGAGCGGA CCCGGGCGCT GCTCGCCCGC CTGTAG
|
Protein sequence | MESRILSLAA LTVLELSPPD MVEAAARAGY SHVGLRLVPA TVEEHHYPLL ADAGLRRRTL ARLRDSGVRT LDVEILRLRP DTRVGEFAAV LEVGAEFGAR YVLVAGNDDD ERRSADNFAA LCDLARPLGL DPHLEFMPWT GIRDLRQAAR VVEAAARDNA GLLLDAFHFD RSASSLEDLR AIPPARLGYA QLCDVVGPRP TSMDEILRQA REERRFPGDG GLDLLALLRA LPENLPLSLE VPALDLLARG VDGAERARLA IERTRALLAR L
|
| |