Gene PA14_02960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_02960 
Symbol 
ID4383649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp258505 
End bp259320 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content72% 
IMG OID639322788 
Producthypothetical protein 
Protein accessionYP_788389 
Protein GI116053951 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000610778 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATCGA GGATTCTTTC CCTGGCGGCG CTCACCGTGC TCGAGCTGTC GCCCCCGGAC 
ATGGTCGAGG CTGCCGCCCG TGCCGGCTAC AGTCATGTCG GCCTGCGCCT GGTGCCGGCC
ACCGTGGAAG AGCACCACTA TCCGCTGCTG GCCGATGCCG GCCTGCGCCG GCGGACCCTG
GCGCGGCTGC GCGACAGCGG AGTGCGCACG CTGGACGTGG AGATCCTGCG CCTGCGTCCG
GACACCCGCG TCGGCGAGTT CGCCGCGGTG CTGGAGGTCG GCGCCGAGTT CGGCGCGCGC
TATGTGCTGG TGGCCGGCAA CGATGACGAC GAGCGGCGCA GCGCGGACAA TTTCGCCGCG
TTGTGCGACC TGGCGCGGCC GCTCGGCCTC GATCCGCACC TGGAGTTCAT GCCCTGGACC
GGGATCCGCG ACCTGCGGCA GGCCGCACGG GTGGTCGAGG CGGCGGCGCG GGACAACGCC
GGCCTGTTGC TGGACGCCTT CCATTTCGAC CGCTCGGCCA GCAGCCTGGA AGACCTGCGG
GCGATCCCGC CTGCGCGCCT GGGCTACGCG CAACTCTGCG ATGTCGTCGG GCCGCGTCCG
ACGTCGATGG ACGAAATCCT TCGCCAGGCC CGCGAGGAAC GGCGTTTCCC TGGCGATGGC
GGGCTCGATC TGCTGGCGCT GCTGCGCGCC TTGCCGGAGA ACCTGCCGCT GAGCCTGGAG
GTGCCCGCGC TGGATCTGCT CGCGCGCGGC GTGGATGGCG CGGAGCGGGC GCGGCTGGCG
ATCGAGCGGA CCCGGGCGCT GCTCGCCCGC CTGTAG
 
Protein sequence
MESRILSLAA LTVLELSPPD MVEAAARAGY SHVGLRLVPA TVEEHHYPLL ADAGLRRRTL 
ARLRDSGVRT LDVEILRLRP DTRVGEFAAV LEVGAEFGAR YVLVAGNDDD ERRSADNFAA
LCDLARPLGL DPHLEFMPWT GIRDLRQAAR VVEAAARDNA GLLLDAFHFD RSASSLEDLR
AIPPARLGYA QLCDVVGPRP TSMDEILRQA REERRFPGDG GLDLLALLRA LPENLPLSLE
VPALDLLARG VDGAERARLA IERTRALLAR L