Gene PA14_02930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_02930 
Symbol 
ID4383648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp257439 
End bp258482 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content71% 
IMG OID639322787 
Productputative oxidoreductase 
Protein accessionYP_788388 
Protein GI116053950 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00065533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGACGCAC CGCTTCGCAT CGCCCTCATC GGCGCCGGCA ACATGGGCCG CCAGCATTAC 
CATCGCTTGC AGCGAATCGC CGGCGCGCGC CTGTGTGCGG TGGCCGATCC CCAGGGCCAG
GCGTTCGCCG CGGACGCCGG CGTGCCCTGG TTCGGCGATC ATCGGAGGTT GCTGGAAGAA
GCCCGGCCGC AAGCGGCGAT CGTCGCCAAT CCGAACAACC TGCATGTCGC CACCGCCCTC
GACTGCCTCG CCGCCGGGGT GCCGCTGCTG CTGGAAAAAC CGGTCGGCGT GCAGCTCGAC
GAAGTGAGCG AGCTGGTGGC CGTCGCCCGG CGATCTGGCG TTCCGCTGCT GGTCGGTCAC
CATCGTCGGC ACAATCCGCT GGTCGTGCGG GCGCGCCAAT TGATCGCCGA GGGCGCGCTC
GGTCGGTTGC TGTCGGTCAC CGCGCTCTGG CAGTTGAAGA AGCCCGACAG TTATTTCGAG
GTGGCCTGGC GTCGCGAGCC CGGCGCGGGA ATGTTGCTGA CCAACCTGAT CCATGACCTC
GACCTGCTCC GCCACCTGTG CGGGGAAGTG CGGGAGGTGC AGGCGCTGGC CGGCAACGCT
ATCCGTGGCC TGCCCAACGA AGACAACGTC GCGCTGCTCC TGCGCTTCGC CAATGGCGCC
CTGGGCAGCC TGACCGGTTG CGACGCTGCG GCGGCGCCCT GGAGCTGGGA GCTGGCCGCC
GGGGAGAACC CGGTCTATCC GCGCCAGGCC GAGCAACCCT GCTACCTGCT GGCCGGCACC
GAGGGTGCCC TGAGCCTGCC CCAGCTCCGC CGCTGGCGCT ACGCCGAGGC CCGGCAGGGC
TGGCACGACC CGCTGGCGGC CAGCGTGGAG GCCGTGGCGG CAGGCGACCC CCTGCAACGC
CAGCTAGAGC ACTTCGTCCG GGTCGCGCGG GGCGAGGAAG CGCCATTGAT GGATGCCACC
GACGCCGCTC GCACCCTGGC GCTGGTCGAG GCGGTTCGCG AGGCCGCGCG CAGTGGCCGG
GCCTGCGCGC CGGCCAGTTT CTGA
 
Protein sequence
MDAPLRIALI GAGNMGRQHY HRLQRIAGAR LCAVADPQGQ AFAADAGVPW FGDHRRLLEE 
ARPQAAIVAN PNNLHVATAL DCLAAGVPLL LEKPVGVQLD EVSELVAVAR RSGVPLLVGH
HRRHNPLVVR ARQLIAEGAL GRLLSVTALW QLKKPDSYFE VAWRREPGAG MLLTNLIHDL
DLLRHLCGEV REVQALAGNA IRGLPNEDNV ALLLRFANGA LGSLTGCDAA AAPWSWELAA
GENPVYPRQA EQPCYLLAGT EGALSLPQLR RWRYAEARQG WHDPLAASVE AVAAGDPLQR
QLEHFVRVAR GEEAPLMDAT DAARTLALVE AVREAARSGR ACAPASF