| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_02850 |
|---|
| Symbol | pcaC |
|---|
| ID | 4383643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 252131 |
|---|
| End bp | 252532 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639322782 |
|---|
| Product | gamma-carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_788383 |
|---|
| Protein GI | 116053945 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00181902 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA AACAACGCTA CGAAGCCGGC ATGCAAGTGC GCCGCGCGGT GCTCGGCGAC
GCCCACGTCG AGCGCAGCCT GGCCAACCTG ACGCCGTTCA ACGAAGAGTT CCAGGAGATG
ATCACCCGCC ACGCCTGGGG CGACATCTGG ACCCGTCCGG GGCTGCCGCG ACACACCCGC
AGCCTGGTCA CCATCGCCAT GCTGATCGGC ATGAACCGCA ACGAGGAACT CAAGCTGCAT
CTGAGCGCGG CGAAGAACAA CGGGGTGAGC CGCGACGAGA TCAAGGAAGT GATCATGCAG
AGCGCCATCT ACTGCGGCAT TCCCGCGGCC AACGCGACCT TCCACCTGGC CGAATCGGTG
TGGGACGAGC TTGGCGTGGA GTCGCAGCAG ACGTCCCGGT AG
|
|---|
| Protein sequence | MDEKQRYEAG MQVRRAVLGD AHVERSLANL TPFNEEFQEM ITRHAWGDIW TRPGLPRHTR
SLVTIAMLIG MNRNEELKLH LSAAKNNGVS RDEIKEVIMQ SAIYCGIPAA NATFHLAESV
WDELGVESQQ TSR
|
|---|
| |