| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_02580 |
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| Symbol | mdcD |
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| ID | 4383603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 230222 |
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| End bp | 231085 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639322761 |
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| Product | malonate decarboxylase subunit beta |
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| Protein accession | YP_788362 |
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| Protein GI | 116053924 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
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| TIGRFAM ID | [TIGR03133] malonate decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0046071 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACG TCGCCCGCCT GCTGGCGCTG CGCAGCTTCA CCGAACTGGG AGCGCGCCAA
CGCGCCCGTG CCCTGCTCGA CGCGGGCAGC TTCCGCGAGT TGCTCGATCC CTTCGCCGGC
GTGCAGTCAC CCTGGCTGGA ACGACAGGGC ATCGTGCCCC AGGCCGACGA TGGGGTAGTG
GTCGCCCGTG GCCTGCTCGA CGGCCAGCCG GCGGTGCTCG CCGCCATCGA AGGTGCCTTC
CAGGGCGGCA GCCTTGGCGA GGTCAGCGGA GCGAAGATCG CCGGCGCGCT GGAGCTGGCC
GCCGAGGACA ACCGCAACGG CGTTCCGACC CGGGCCCTGC TGTTGCTGGA AACCGGTGGC
GTGCGCCTGC AGGAAGCCAA CCTCGGACTG GCGGCGATCG CCGAGATCCA GGCGGCCATC
GTCGATCTGC AGCGCTACCA GCCGGTGGTG GCGGTGATCG CCGGGCCGGT CGGCTGCTTC
GGCGGCATGT CCATCGCCGC CGGGCTGTGC AGCTACGTGC TGGTGACCCG CGAGGCGCGC
CTCGGATTGA ACGGTCCGCA GGTGATCGAA CAGGAGGCCG GCATCGCTGA ATACGACTCG
CGCGACCGGC CGTTCATCTG GAGCCTCACC GGCGGCGAGC AGCGCTTCGC CAGCGGTCTC
GCCGACGCCT ACCTGGCCGA CGACCTCGAT GAGGTACGCA CCTCGGTACT CGCGTATTTC
GCCAAGGGCC TGCCGGCACG GCCGCGCTGC CGCCGCGCCG AGGATTACCT GCGGCGGCTG
GGCGACCTCG ATACCGCCGA GCAACCGGAT GCCGCCGGCG TGCGCCGGCT GTACCAGGGG
CTGGGCCAAG GAGATGCAAC ATGA
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| Protein sequence | MTDVARLLAL RSFTELGARQ RARALLDAGS FRELLDPFAG VQSPWLERQG IVPQADDGVV
VARGLLDGQP AVLAAIEGAF QGGSLGEVSG AKIAGALELA AEDNRNGVPT RALLLLETGG
VRLQEANLGL AAIAEIQAAI VDLQRYQPVV AVIAGPVGCF GGMSIAAGLC SYVLVTREAR
LGLNGPQVIE QEAGIAEYDS RDRPFIWSLT GGEQRFASGL ADAYLADDLD EVRTSVLAYF
AKGLPARPRC RRAEDYLRRL GDLDTAEQPD AAGVRRLYQG LGQGDAT
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