Gene PA14_02060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_02060 
Symbol 
ID4383565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp187980 
End bp188816 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content62% 
IMG OID639322722 
Producthypothetical protein 
Protein accessionYP_788323 
Protein GI116053886 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3248] Nucleoside-binding outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.520939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.571612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA CACTCGCCAC CGTGATGCTA GCCGGGGGGC TGCTGGCCGC AGGCCAGGCT 
GTCGCCGAAG ACCATGACAT GACGCCGACC CACGAGACCG ACTCGGGGCC GCTGCTCTGG
CACAACGAGA GCCTGACCTA CCTCTACGGC AAGAACTTCA AGATCAACCC GCCGATCCAG
CAGACCTTCA CCCTGGAACA TGCCAGCGGC TGGACCTGGG GCGACCTGTT CATCTTCTTC
GACCAGATCA ACTACAACGG CAAGGAAGAC GCCAGCAACG GCAAGAACAC CTACTACGGC
GAGATCACTC CGCGCCTGAG CTTCGGCAAG CTCACCGGAG CGGACCTCTC CTTCGGCCCG
GTGAAGGACG TGCTGCTGGC CGGCACTTAC GAGTTCGGCG AAGGCGACAC CGAGGCCTAC
CTGCTCGGCC CGGGCTTCGA CCTGGCGATC CCCGGCTTCG ACTACTTCCA GCTCAACTTC
TACTACCGCA AGCCCGACGG CAACCGCGTG CGCGCCGGCG CCTGGCAGAT CACCCCGGTG
TGGTCCTACA CCATTCCGGT GGGCAACTCC GACATCCTCA TCGACGGCTA CATGGACTGG
GTGATCAACA ACAAGAGCGC CAGCACCAGC CGCCGCAACC AGAGCGACTA CCACGCCAAC
CTGCACTTCA ACCCACAGGT CAAGTACGAC CTGGGCAAGG CCCTCGGCTA CGAGCCTAAG
CACCTGTACG TGGGCCTGGA GTACGACTAC TGGTCCGACA AGTACGGTGT GAAGGACTCG
CAGTACTTCA CCACCGACCA GAACACCGCC AGCTTCCTGG TCAAGTACCA CTTCTGA
 
Protein sequence
MSRTLATVML AGGLLAAGQA VAEDHDMTPT HETDSGPLLW HNESLTYLYG KNFKINPPIQ 
QTFTLEHASG WTWGDLFIFF DQINYNGKED ASNGKNTYYG EITPRLSFGK LTGADLSFGP
VKDVLLAGTY EFGEGDTEAY LLGPGFDLAI PGFDYFQLNF YYRKPDGNRV RAGAWQITPV
WSYTIPVGNS DILIDGYMDW VINNKSASTS RRNQSDYHAN LHFNPQVKYD LGKALGYEPK
HLYVGLEYDY WSDKYGVKDS QYFTTDQNTA SFLVKYHF