Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_01980 |
Symbol | |
ID | 4383559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 181628 |
End bp | 182566 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639322716 |
Product | LysR family transcriptional regulator |
Protein accession | YP_788317 |
Protein GI | 116053880 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.445097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACACAT TGCAAGGCAT GCGCGTGTTT GCCAGGGTGG TGGACAGCGG CAGCTTCACT TCCGCCGCCC AGGCCCTGGA CCTGTCCACC GCGCAGGTAT CGCGGCTGAT CTCCGACCTG GAGGCGCACC TGCAGACGCG CCTGCTGCAC CGCACCACCC GGCGCCTGGC CCTGACCGAG GCCGGCGAGC GCTACCTGGA GCGGTGCCGC GGGATCCTCG AGGACATCGA GGTCGCCGAG GCCGAAGCCG CCGGCGCGCA CATCCGCCCC TGCGGCCGCT TGCGCGTGCA GTCGCTGATG GGCATGGGCC AGCATCACCT GGTGCCGATG ATCGCCCGCT ACGGCGCACT GTTCCCCGAC GTGGTGATCG AGCTGACCCT GTCCCAGCGC AACCCGGACA TGCTCGAGGA AGGCCAGGAC GTGCTGATCA CCGGCGAGCG CCAGTTGCCC GACTCGGAGT TCGTCGCCCA GCGCCTGGGC AGCATCCACA GTGTGCTCTG CGCCAGTCCC GGCTACCTGC AACAGCACGG CGTGCCGCGC TCGGTGGACG ACCTGGAGCG CCACGTCTGC CTGCGCCTGC AGGATCCGGC CTACCCGGAG GGCTGGATCT TCGCCGACGA GCAGGGCGAG CGCACCGTCA GCCCGCAGAA CACCTTCATG GTCAATGTCG CCGAGGTCAT GGCCCAGGCG GCCAAGGCCG ACCTCGGCAT CGCCCTGCTG CCCAGCTACG TGGCGGCCGC GGCGCTGCGC AACGGCGAGC TGCTACGGGT GTTGCCCGGC CATGCCATGC ACGAGCGGAC CATCTATGCG CTGTATCCCT CGCGGCGTTA CCTGGACGCG AAGATCCGCA CCTGGGTCGA TCTGTTGCAA CAGGAACTTC CCCAGGCATT CGCCCGCGAC GAAACCACCA TGCAAAGTTC AAGTTACTGG GCACAGTGA
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Protein sequence | MDTLQGMRVF ARVVDSGSFT SAAQALDLST AQVSRLISDL EAHLQTRLLH RTTRRLALTE AGERYLERCR GILEDIEVAE AEAAGAHIRP CGRLRVQSLM GMGQHHLVPM IARYGALFPD VVIELTLSQR NPDMLEEGQD VLITGERQLP DSEFVAQRLG SIHSVLCASP GYLQQHGVPR SVDDLERHVC LRLQDPAYPE GWIFADEQGE RTVSPQNTFM VNVAEVMAQA AKADLGIALL PSYVAAAALR NGELLRVLPG HAMHERTIYA LYPSRRYLDA KIRTWVDLLQ QELPQAFARD ETTMQSSSYW AQ
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