| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01960 |
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| Symbol | |
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| ID | 4383557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 177315 |
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| End bp | 178385 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639322714 |
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| Product | putative RND efflux membrane fusion protein precursor |
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| Protein accession | YP_788315 |
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| Protein GI | 116053878 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.496395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGT TTTCCCTCGC CGGCCTGTTC GGCTTCGCCC TGCTCCTCTC CGGCTGCGGC
GACGAGCCGC CGCCGGCACC GCCGCGGCCG GTGCTGACGG TGACCGTGAA GACCCTGAAG
AACGACGACC TCGGTCGCTT CGCCGGGAGC ATCCAGGCGC GCTACGAGAG CGTGCTCGGC
TTCCGCACCA ACGGACGGAT CGCCTCGCGC CTGTTCGACG TCGGTGACTT CGTCGGCAAG
GGCGCGCTGC TGGCAACCCT CGACCCCACC GACCAGCAGA ACCAGTTGCG CGCCAGCCAG
GGCGACCTGG CCAGCGCCGA GGCGCAGTTG ATCGACGCCC AGGCCAATGC CCGGCGCCAG
GAAGAACTGT TCGCCCGCAG CGTCACCGCC CAGGCGCGCC TGGACGATGC GCGGACCCGC
CTGAAGACCA GCCAGGCCAG CTTCGACCAG GCCAAAGCGG CGGTGCAGCA GGCCAGGGAC
CAGCTTTCCT ACACGCGCCT GGTGACCGAT TTCGACGGCG TCATCACCAC CTGGCACGCC
GAGGCCGGGC AAGTGGTCAG CGCCGGCCAG GCGGTGGTCA CCCTGGCCCG GCCCGAGGTG
CGCGAGGCGG TCTTCGACCT GCCCACCGAG GTCGCCGAGA GCCTGCCGGC CGACGCGCGC
TTCCTGGTCA GCGCCCAGCT CGACCCGCAG GCCAGGACCA CCGGCAGCAT CCGCGAGCTG
GGTCCGCAGG CCGACGCCTC GACCCGCACC CGTCGCGTGC GCCTGAGCCT GGCGCAGACG
CCGGAGGCGT TCCGCCTCGG CTCGACCATC CAGGTCCAGC TGAGCAGCGC CGGTAGCGTG
CGCAGTGTGC TGCCGGCCAG CGTGCTGCTG GAGCGGGACG GCAAGACCCA GGTCTGGGTC
GTCGATGGGA AACAGTCCAG CGTGGCCCTG CGCGAGGTAC AGGTGCTCAG CCGCGACGAA
CGCCAGGTGG TGATCGGACA GGGCCTGGCC GACGGCGACC GGGTGGTCCG CGCCGGAGTC
AACAGCCTCA AGCCCGGCCA GAAGATCAAA CTCGACGAGG ATGCGCGATG A
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| Protein sequence | MKPFSLAGLF GFALLLSGCG DEPPPAPPRP VLTVTVKTLK NDDLGRFAGS IQARYESVLG
FRTNGRIASR LFDVGDFVGK GALLATLDPT DQQNQLRASQ GDLASAEAQL IDAQANARRQ
EELFARSVTA QARLDDARTR LKTSQASFDQ AKAAVQQARD QLSYTRLVTD FDGVITTWHA
EAGQVVSAGQ AVVTLARPEV REAVFDLPTE VAESLPADAR FLVSAQLDPQ ARTTGSIREL
GPQADASTRT RRVRLSLAQT PEAFRLGSTI QVQLSSAGSV RSVLPASVLL ERDGKTQVWV
VDGKQSSVAL REVQVLSRDE RQVVIGQGLA DGDRVVRAGV NSLKPGQKIK LDEDAR
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