Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_01900 |
Symbol | pcaH |
ID | 4383553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 173624 |
End bp | 174343 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639322710 |
Product | protocatechuate 3,4-dioxygenase, beta subunit |
Protein accession | YP_788311 |
Protein GI | 116053874 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.867903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.651283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACG CCGAAAGCCG TCGTTTCGTC ATCCGTGACC GAAACTGGCA CCCCAAAGCC TTGACCCCCG ACTACAAGAC CTCCGTGCCG CGCTCGCCGA GCCAGGCGCT GGTGAGCATC CCGCAATCGC TCTCGGAAAC CAGCGGGCCG GACTTCTCCC ACCTCAGGCT CGGCCGCCAC GACAACGACC TGCTGCTCAA CTTCGACCAC GGCGGCCTGC CCCAGGGCGA GCGCATCATC ATGTTCGGCC GGGTCTTCGA CCAGTACGGC AAGCCGGTCC CGCACACCCT GGTGGAGATG TGGCAGGCCA ACGCCGGCGG GCGCTACCGG CACAAGAACG ACCGCTACCT GGCGCCGCTC GACCCGAACT TCGGCGGCGT CGGCCGGACC CTCACCGACA GCGAGGGCCA CTATTACTTC CGCACCATCA AGCCCGGGCC CTATCCCTGG CGCAACGGCC CCAACGACTG GCGTCCGGCG CACATCCACG TGTCCGTCAG CGGCCCGGCG ATCGCCGCGC GGCTGGTCAC CCAGATGTAC TTCGAGGGCG ACCCGCTGAT CCCCAAGTGC CCGATCATCC GCACCCTTGC CGACCCGGAG GCGGCGCAGA GCCTGATCGG CCGGCTCGAC ATGAGCATGG CCAACCCGAT GGATTGCCTG GCCTACCGCT TCGACATCGT CCTGCGCGGG CAGCGCAAGA CCTTCTTCGA GAACGCCTGA
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Protein sequence | MHDAESRRFV IRDRNWHPKA LTPDYKTSVP RSPSQALVSI PQSLSETSGP DFSHLRLGRH DNDLLLNFDH GGLPQGERII MFGRVFDQYG KPVPHTLVEM WQANAGGRYR HKNDRYLAPL DPNFGGVGRT LTDSEGHYYF RTIKPGPYPW RNGPNDWRPA HIHVSVSGPA IAARLVTQMY FEGDPLIPKC PIIRTLADPE AAQSLIGRLD MSMANPMDCL AYRFDIVLRG QRKTFFENA
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