| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01780 |
|---|
| Symbol | |
|---|
| ID | 4383544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 163296 |
|---|
| End bp | 163922 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639322701 |
|---|
| Product | putative nucleoside 2-deoxyribosyltransferase |
|---|
| Protein accession | YP_788302 |
|---|
| Protein GI | 116053865 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG3613] Nucleoside 2-deoxyribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.0825093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.558604 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAT CCAACGGTTC CAGCAGCCGT CGTACCTTCT TGCGCCTGGC GGCCCTGCTG
CTGCCCGCCG GCGCCCTGCT CGGCAGCCTG CCGGGCGTAC GCGCCGCGGC CAGACCGCGG
AAACTCTATC TGGCCGGTCC CGACGTGTTC CGCGCCGACG CCGTCGCCCA CGGCGAAGCG
CTCAAGGCAC TGTGCGCACG CTACGGCTTC GAAGGCCTCT ACCCGCTGGA CAACGCGCTG
CCGAAACAGC TCGCCGAGCC GCGCGAACAG GCGGCCTGGA TCTACCGCGC CAACATCGGC
CTGATCGAAC GCGCCGACGC GGTGCTGGCC AACCTGAACT TCTTCCGCGG CGCCGAGCCG
GACAGCGGCA CCGCCTTCGA GGTCGGCTAC GCCACCGCTC TCGGCAAGCC GGTCTATGGC
TACGTCGACG ACGCCGGCAG CTACGCCGAG CGGATCCGCC GGCACGCCCC GGAGCTGGTC
GGCGAGGATC CGACCCGCGA CCGCGACGGC ATGGCCCTGG AAGAGTTCGG CCTGCCGCTC
AACCTGATGC TGGCGGTGCC CGGCAGGATC GTCGTCGGCG ACGCCGAGCA GGCTCTCCGG
CAACTCGCCG GGCAATCCCG CGGCTGA
|
|---|
| Protein sequence | MSRSNGSSSR RTFLRLAALL LPAGALLGSL PGVRAAARPR KLYLAGPDVF RADAVAHGEA
LKALCARYGF EGLYPLDNAL PKQLAEPREQ AAWIYRANIG LIERADAVLA NLNFFRGAEP
DSGTAFEVGY ATALGKPVYG YVDDAGSYAE RIRRHAPELV GEDPTRDRDG MALEEFGLPL
NLMLAVPGRI VVGDAEQALR QLAGQSRG
|
|---|
| |