| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01750 |
|---|
| Symbol | |
|---|
| ID | 4383541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 159868 |
|---|
| End bp | 161217 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639322698 |
|---|
| Product | hydroxydechloroatrazine ethylaminohydrolase |
|---|
| Protein accession | YP_788299 |
|---|
| Protein GI | 116053862 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000738453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.736322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCA CCTGGATTCG CAAACCCCTC GCCATCTTCA CCGCCAACGG TCTCGACGCC
GCCGGCGGCC TGGTCGTCGA AGACGGCCGC ATCGTCGAGC TGCTCGGCGC CGGCCAGCAG
CCCGCGCAGC CCTGCGCCAG CCAGTTCGAC GCCAGCCGGC ACGTGGTCTT GCCGGGACTC
ATCAACACCC ATCACCACTT CTACCAGACC CTCACCCGCG CCTGGGCGCC GGTGGTCAAC
CAGCCGCTGT TCCCCTGGCT GAAAACCCTC TACCCGGTCT GGGCGCGGCT GACCCCGGAG
AAGCTCGAAC TGGCCACCAA GGTGGCGCTG GCCGAGCTGC TGCTGTCTGG CTGCACCACT
GCCGCCGACC ACCACTACCT GTTCCCCGGC GGCCTCGAAC AGGCTATCGA CGTGCAGGCC
GGGGTGGTCG AGGAACTGGG CATGCGCGCC ATGCTCACCC GCGGCTCGAT GAGCCTCGGC
GAGAAGGACG GCGGCTTGCC GCCGCAGCAG ACGGTGCAGG AGGCCGAGAC CATCCTCGCC
GACAGCGAGC GACTGATCGC TCGCTACCAC CAGCGCGGCG AAGGCGCCCG GGTGCAGATC
GCCCTGGCGC CCTGCTCGCC GTTCTCGGTG ACTCCGGAGA TCATGCGCGC CAGCGCCGAA
CTGGCGGCGC GCCATGACGT ACGCCTGCAC ACCCACCTGG CGGAGACCCT CGACGAGGAA
GACTTCTGCC TGCAGCGCTT CGGCCTGCGC ACCGTGGACT ACCTGGATAG CGTCGGCTGG
CTCGGCCCGC GCACCTGGCT GGCCCACGGC ATCCACTTCA ACGCCGAGGA GATCCGCCGG
CTCGGCGAGG CGGGCACCGG TATCTGCCAT TGCCCGAGTT CGAACATGCG CCTGGCCTCG
GGCATCTGCC CGACCGTGGA GCTGGAGGCG GCCGGCGCGC CGATTGGCCT GGGAGTCGAT
GGTTCGGCCT CCAACGACGC CTCGAACATG ATCCTCGAGG CGCGCCAGGC CCTGTACCTG
CAACGCCTGC GCTACGGCGC CGAGCGAATC ACCCCGGAAC TCGCCCTGGG CTGGGCCACC
CGTGGCTCGG CACGCCTGCT CGGACGCAGC GACATCGGCG AGCTGGCCCC CGGCAAGCAG
GCCGACCTGG CCTTGTTCAA GCTCGACGAG CTGCGCTTCT CGGGTAGCCA CGACCCGCTC
TCGGCGCTGC TGCTGTGCGC TGCCGACCGT GCCGACCGGG TAATGGTCGG CGGCGCCTGG
CGAGTGGTCG ATGGTGCCGT GGAAGGGCTC GACCTGGCCG CCCTGATCGC CCGCCACCGC
GAGGCGGCGA GCGCCCTGAT CGCCGGGTGA
|
|---|
| Protein sequence | MSRTWIRKPL AIFTANGLDA AGGLVVEDGR IVELLGAGQQ PAQPCASQFD ASRHVVLPGL
INTHHHFYQT LTRAWAPVVN QPLFPWLKTL YPVWARLTPE KLELATKVAL AELLLSGCTT
AADHHYLFPG GLEQAIDVQA GVVEELGMRA MLTRGSMSLG EKDGGLPPQQ TVQEAETILA
DSERLIARYH QRGEGARVQI ALAPCSPFSV TPEIMRASAE LAARHDVRLH THLAETLDEE
DFCLQRFGLR TVDYLDSVGW LGPRTWLAHG IHFNAEEIRR LGEAGTGICH CPSSNMRLAS
GICPTVELEA AGAPIGLGVD GSASNDASNM ILEARQALYL QRLRYGAERI TPELALGWAT
RGSARLLGRS DIGELAPGKQ ADLALFKLDE LRFSGSHDPL SALLLCAADR ADRVMVGGAW
RVVDGAVEGL DLAALIARHR EAASALIAG
|
|---|
| |