| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01690 |
|---|
| Symbol | |
|---|
| ID | 4384254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 155072 |
|---|
| End bp | 156052 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639322694 |
|---|
| Product | putative permease of ABC transporter |
|---|
| Protein accession | YP_788295 |
|---|
| Protein GI | 116053858 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.143832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.694457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCG ATCTGCTCGA CAACCTGCTG TTCGCCATGG TCCGCACCGG TACTCCGCTG
CTGCTGGTGG CGCTGGGCGA ACTGGTCTGC GAGAGAAGCG GAGTGCTCAA CCTGGGCCAG
GAGGGGATGA TGCTGTTCGG CGCGGTGATC GGCTTCATGG TCGCCTTCTC CAGCGGCAGC
CTGTGGCTCG GCGTGCTCCT CGCGGTGCTC GCCGGCATGC TGTTGGCGGC GCTGTTCGCC
GGGGTCGCCC TGTACCTGAA CGCCAACCAG GTGGCCTGCG GCCTGGCGCT GACCATCTTC
GGCGTCGGCC TGTCGTCGTT CGTCGGCGCC GCCTGGGTCG GCAAGCCGCT GCAAGGGTTC
GCCCCGCTGG CGCTGCCGGT GCTGGGCGAG TTGCCGCTGC TCGGGCGCAT GCTGTTCGCC
CAGGACGCGC TGGTCTACCT GAGCCTGGCG CTGTTCGCCG CGGTCGCCTG GATGCTCCTG
CGCAGCCGCG CCGGGCTGGT TCTCCAGGCG GTCGGCGAGA ACCCCGACGC GGCCAGCGCG
ATGGGCCTGC CGGTGCTGCG CGTGCGCACC CTGGCGGTGC TCTTCGGCGG CGCCATGGCC
GGCCTGGCCG GTGCCTACCT GTCGCTGGCC TACACGCCGA TGTGGGCGGA GAACATGACC
GCCGGACGCG GCTGGATCGC CCTGGCGCTG GTGGTCTTCG CCAGTTGGCG GGTGTTCCGC
GTGCTGCTCG GTGCCTGGTT GTTCGGCCTG GCCAGCATCC TGCACCTGGT GGCCCAGGGG
ATCGGGCTGT CGATTCCGGC CAACCTGCTG GCGATGCTGC CCTATGCGGC GACCATCCTG
GTGCTGGTCC TGCTCTCCCG CGATGCCCTG CGCACCCGGC TGTATGCCCC GGTTTCCCTG
GGCCAGCCGT GGAAGGCCGG GGCACTGACG AGGGCAGGTT CTTCGATTAG TTGTTTTAAC
TATTTATATA TTCTTCGATA G
|
|---|
| Protein sequence | MDIDLLDNLL FAMVRTGTPL LLVALGELVC ERSGVLNLGQ EGMMLFGAVI GFMVAFSSGS
LWLGVLLAVL AGMLLAALFA GVALYLNANQ VACGLALTIF GVGLSSFVGA AWVGKPLQGF
APLALPVLGE LPLLGRMLFA QDALVYLSLA LFAAVAWMLL RSRAGLVLQA VGENPDAASA
MGLPVLRVRT LAVLFGGAMA GLAGAYLSLA YTPMWAENMT AGRGWIALAL VVFASWRVFR
VLLGAWLFGL ASILHLVAQG IGLSIPANLL AMLPYAATIL VLVLLSRDAL RTRLYAPVSL
GQPWKAGALT RAGSSISCFN YLYILR
|
|---|
| |