Gene PA14_01380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_01380 
Symbol 
ID4383532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp132234 
End bp133148 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content67% 
IMG OID639322670 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_788271 
Protein GI116053834 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG TCATCGATCG CCACAGCCAG CCGACCTGGC GCGACTTCCT CGAACTGACC 
AAGCCCAAGG TCGTGGTGCT GATGCTGATC ACCTCGCTGA TCGGCATGCT GCTCGCCACC
AAGGCGCCGC TGGATGGCTT CGTGCCCTGG CAGGTGCTGA TCTTCGGCAA CCTCGGCATC
GGCCTTTGTG CCGGCGCGGC GGCGGCGGTC AACCATGTGG TGGACCGGCG CATCGACTCG
ATCATGGCGC GGACCCACAA GCGGCCGCTG GCCGAGGGCC GGGTGTCGCC GAGCATGGCG
CTGGGCTTCG CGCTGCTCCT GGCGCTGGCC GGGATGGCCG TGCTGCTGGC CTTCACCAAC
CCGCTGACGG CCTGGCTGAC CCTCGCCTCG CTGCTCGGCT ATGCGGCGCT CTACACCGGC
TTCCTGAAGC GCGCCACGCC GCAGAACATC GTCATCGGCG GGCTCGCCGG GGCGGCGCCG
CCGCTGCTCG GCTGGGTCGC CATCACCGGC CACCTGAGCG CCGAGCCGCT GTTGCTGGTA
CTGATCATCT TCGCCTGGAC CCCACCGCAC TTCTGGGCGC TATGCATCCA CCGCAAGGAC
GAATACGCCA AGGCCGACAT CCCGATGCTG CCGGTGACCC ACGGCGAGCG CTACACCAAG
CTGCACATCC TGCTCTATAC CCTGGTGCTG TTCGCGGTGA GCCTGATGCC GTTCGTCATC
CACATGAGCG GGCTGGTCTA TCTGCTCTGC GCCCTGGCCC TGGGCGCGCG CTTCCTCGAC
TGGGCCTGGG CGCTCTACTG TGACAGCCGG CCACATGCGG CGATAAAGAC CTTCAAGTAC
TCTATCGTCT ACCTGTTCCT GCTGTTCATG GCGCTGCTGG TGGACCACTA TCTGCCGCTG
AAGCTGCTTC TCTGA
 
Protein sequence
MATVIDRHSQ PTWRDFLELT KPKVVVLMLI TSLIGMLLAT KAPLDGFVPW QVLIFGNLGI 
GLCAGAAAAV NHVVDRRIDS IMARTHKRPL AEGRVSPSMA LGFALLLALA GMAVLLAFTN
PLTAWLTLAS LLGYAALYTG FLKRATPQNI VIGGLAGAAP PLLGWVAITG HLSAEPLLLV
LIIFAWTPPH FWALCIHRKD EYAKADIPML PVTHGERYTK LHILLYTLVL FAVSLMPFVI
HMSGLVYLLC ALALGARFLD WAWALYCDSR PHAAIKTFKY SIVYLFLLFM ALLVDHYLPL
KLLL