Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_01290 |
Symbol | coxB |
ID | 4383524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 125293 |
End bp | 126417 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639322662 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_788263 |
Protein GI | 116053826 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.46157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAC ATCCACGAGT CTGGATGGGC TTCCTTTTGC TCTCGGCGAT CAGCCAGGCG AATGCCGCCT GGACGGTCAA CATGGCCCCG GGCGCTACCG AGGTGAGCCG GTCCGTCTTC GACCTGCACA TGACCATCTT CTGGATCTGC GTGGTGATCG GCGTGCTGGT CTTCGGCGCG ATGTTCTGGT CGATGATCGT CCACCGCCGC TCCACCGGCC AGCAGCCGGC GCATTTCCAC GAGAGCACCA CGGTGGAAAT CCTCTGGACG GTGGTGCCGT TCGTGATCCT GGTGGTGATG GCGGTGCCCG CCACCCGCAC CCTGATCCAC ATCTACGACA CTTCCGAGCC GGAGCTGGAC GTGCAGGTCA CCGGCTACCA GTGGAAGTGG CAGTACAAGT ACCTGGGCCA GGACGTCGAG TACTTCAGCA ACCTGGCCAC CCCGCAGGAC CAGATCCACA ACCGGCAGGC GAAGGACGAG CATTACCTGC TGGAGGTGGA CGAGCCGCTG GTGCTGCCGG TGGGCACCAA GGTGCGCTTC CTGATCACCT CCAGCGACGT GATCCATTCC TGGTGGGTGC CGGCCTTCGC GGTCAAGCGC GACGCCATCC CCGGCTTCGT CAACGAGGCC TGGACCAAGG TCGACGAGCC CGGCATCTAC CGCGGCCAGT GCGCCGAGCT GTGCGGCAAG GACCACGGCT TCATGCCGAT CGTGGTCGAC GTCAAGCCCA AGGCCGAGTT CGACCAGTGG CTGGCCAAGC GCAAGGAAGA GGCGGCGAAA GTCAAGGAAC TGACCAGCAA GGAGTGGACC AAGGAAGAAC TGGTCGCGCG CGGCGACAAG GTCTACCACA CCATCTGCGC CGCCTGCCAC CAGGCCGAAG GCCAGGGCAT GCCGCCGATG TTCCCGGCGC TGAAGGGCTC GAAGATCGTC ACCGGGCCCA AGGAGCACCA CCTGGAAGTG GTCTTCAACG GCGTGCCCGG CACCGCCATG GCGGCCTTCG GCAAGCAGCT CAACGAGGTC GACCTGGCCG CGGTGATCAC CTACGAGCGC AACGCCTGGG GCAACGACGA TGGCGACATG GTCACCCCGA AAGACGTCGT CGCCTACAAG CAGAAACAAC AATAG
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Protein sequence | MLRHPRVWMG FLLLSAISQA NAAWTVNMAP GATEVSRSVF DLHMTIFWIC VVIGVLVFGA MFWSMIVHRR STGQQPAHFH ESTTVEILWT VVPFVILVVM AVPATRTLIH IYDTSEPELD VQVTGYQWKW QYKYLGQDVE YFSNLATPQD QIHNRQAKDE HYLLEVDEPL VLPVGTKVRF LITSSDVIHS WWVPAFAVKR DAIPGFVNEA WTKVDEPGIY RGQCAELCGK DHGFMPIVVD VKPKAEFDQW LAKRKEEAAK VKELTSKEWT KEELVARGDK VYHTICAACH QAEGQGMPPM FPALKGSKIV TGPKEHHLEV VFNGVPGTAM AAFGKQLNEV DLAAVITYER NAWGNDDGDM VTPKDVVAYK QKQQ
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