| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01040 |
|---|
| Symbol | |
|---|
| ID | 4383504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 101659 |
|---|
| End bp | 102504 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639322642 |
|---|
| Product | putative secretion protein |
|---|
| Protein accession | YP_788243 |
|---|
| Protein GI | 116053806 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACC CTTCATTCGC ATCCGGGCGC CTGGGCTCCC GGCTACAGGG AAGTATCGCG
ATGATCGCCG AAGAACTGTT GCGCGCCGGG CGCCTGGACG ATGCCTTGAA AGCCTTGCAG
GAACAGGTGC GCAGCCAGCC GTCGAACGCC ACCCTGCGGA TCTTCCTGTT CCAGCTGCTG
GCCGTGATGG GCCAGTGGGC GCGGGCGCAG AACCAGCTCA AGGTGGTCGG CGAACTGGAT
GCCTCGGCGC TGCCGATGGT ACAGACCTAC TCCACCGCCA TCGACTGCGA GGCGCTGCGC
CGCGAGGTGT TCGCCGGGCG CCTGACGCCG GTGATCCTCG GCCAGCCGGC GGAATGGATC
GCGCCGCTGT TGCAGGCCCT GAGCCTGGAC GCCGAGGGCC ATGGCGAGGC CGCCCAGGCC
CTGCGCGAGC AGGCCTTCGA CGCCGCGCCG GCGGTGCCCG GGCGGATCGG CGAAGCGCCG
TTCGCCTGGC TGGCAGATGC CGACACGCGC CTCGGCCCGG TGCTCGAGGT AATCGTCAAC
GGTCGCTATG CCTGGTTGCC GATGAGCAAC CTGCGCAGCC TCAAGGTCGA GGCGCCGAGC
GACCTGCGCG ACCTGGTCTG GCTGCCGGCC GAACTGACCC TGGCCAACGG TGGCGCCACC
GTCGCGCTGC TGCCGGCGCG CTACGCGGAA ACCGTCGAGC ACGGCGACGA CGCCGCGCGC
CTGGGGCGCA AGACCGAATG GCTGGATAGC GGCCTGCCGG TCGGCCAGCG GCTGTTCGTC
ACCGATGCCG GCGAGACCGC GCTGTTCGAC CTGCGTGAGC TGGACTTCGA GCCGACGGAC
GCCTGA
|
|---|
| Protein sequence | MADPSFASGR LGSRLQGSIA MIAEELLRAG RLDDALKALQ EQVRSQPSNA TLRIFLFQLL
AVMGQWARAQ NQLKVVGELD ASALPMVQTY STAIDCEALR REVFAGRLTP VILGQPAEWI
APLLQALSLD AEGHGEAAQA LREQAFDAAP AVPGRIGEAP FAWLADADTR LGPVLEVIVN
GRYAWLPMSN LRSLKVEAPS DLRDLVWLPA ELTLANGGAT VALLPARYAE TVEHGDDAAR
LGRKTEWLDS GLPVGQRLFV TDAGETALFD LRELDFEPTD A
|
|---|
| |