Gene PA14_01030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_01030 
Symbol 
ID4383503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp101003 
End bp101491 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID639322641 
Producthypothetical protein 
Protein accessionYP_788242 
Protein GI116053805 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTG ATATGTTCAT CAAGATCGGC GACGTCAAGG GTGAGTCCAA GGACAAGACT 
CACGCCGAGG AAATCGACGT GCTGGCATGG AGCTGGGGCA TGTCCCAGTC CGGGTCGATG
CACATGGGCG GTGGCGGCGG CGCCGGCAAG GTCAACGTGC AGGACCTGTC GTTCACCAAG
TACATCGACA AGTCCACGCC CAACCTGATG ATGGCCTGCT CCAGCGGCAA GCACTATCCG
CAGGCGAAGC TGACCATCCG CAAGGCCGGC GGCGAGAACC AGGTCGAGTA CCTGATCATC
ACCCTGAAGG AAGTCCTGGT GTCCTCGGTG AGCACCGGCG GCAGCGGTGG CGAGGATCGC
CTGACCGAGA ACGTGACCCT GAACTTCGCC CAGGTCCAGG TCGACTACCA GCCGCAGAAG
GCGGATGGCG CGAAGGACGG CGGTCCGGTC AAGTACGGCT GGAACATCCG CCAGAACGTG
CAGGCCTGA
 
Protein sequence
MAVDMFIKIG DVKGESKDKT HAEEIDVLAW SWGMSQSGSM HMGGGGGAGK VNVQDLSFTK 
YIDKSTPNLM MACSSGKHYP QAKLTIRKAG GENQVEYLII TLKEVLVSSV STGGSGGEDR
LTENVTLNFA QVQVDYQPQK ADGAKDGGPV KYGWNIRQNV QA