Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_01030 |
Symbol | |
ID | 4383503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 101003 |
End bp | 101491 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639322641 |
Product | hypothetical protein |
Protein accession | YP_788242 |
Protein GI | 116053805 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTG ATATGTTCAT CAAGATCGGC GACGTCAAGG GTGAGTCCAA GGACAAGACT CACGCCGAGG AAATCGACGT GCTGGCATGG AGCTGGGGCA TGTCCCAGTC CGGGTCGATG CACATGGGCG GTGGCGGCGG CGCCGGCAAG GTCAACGTGC AGGACCTGTC GTTCACCAAG TACATCGACA AGTCCACGCC CAACCTGATG ATGGCCTGCT CCAGCGGCAA GCACTATCCG CAGGCGAAGC TGACCATCCG CAAGGCCGGC GGCGAGAACC AGGTCGAGTA CCTGATCATC ACCCTGAAGG AAGTCCTGGT GTCCTCGGTG AGCACCGGCG GCAGCGGTGG CGAGGATCGC CTGACCGAGA ACGTGACCCT GAACTTCGCC CAGGTCCAGG TCGACTACCA GCCGCAGAAG GCGGATGGCG CGAAGGACGG CGGTCCGGTC AAGTACGGCT GGAACATCCG CCAGAACGTG CAGGCCTGA
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Protein sequence | MAVDMFIKIG DVKGESKDKT HAEEIDVLAW SWGMSQSGSM HMGGGGGAGK VNVQDLSFTK YIDKSTPNLM MACSSGKHYP QAKLTIRKAG GENQVEYLII TLKEVLVSSV STGGSGGEDR LTENVTLNFA QVQVDYQPQK ADGAKDGGPV KYGWNIRQNV QA
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