| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_00910 |
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| Symbol | |
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| ID | 4380423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 89166 |
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| End bp | 92474 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639322632 |
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| Product | hypothetical protein |
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| Protein accession | YP_788233 |
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| Protein GI | 116053797 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.617351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGTC TCGCCGAGGT CAGCGCGCCG GACGCCGCCA GCGTCGCCAC CGCCGAAGAG
CTGGCGACCC TCAAGCAACG CATGGACGAG GCCCTGGCCC TGCTCAAGCG GGCCAAGCTG
GGCGGCAGCG AGCGGCGCAA CCTGTACGAG TTGCCCTGGT ACGTGATCAT CGGCCCGCCC
GGTTCGGGCA AGACCACCGC GCTGATGAAC TCCGGCCTGG ACTTCCCGCT CGCCGCACAG
ATGGGCGCCG GGGCGATCCG CGGGGTCGGC GGCACGCGCA ACTGCGACTG GTGGTTCACC
GACGAAGCGG TGCTGCTGGA CACCGCCGGC CGCTATACCA CCCAGGACAG CCACGCCCAG
GTGGACAAGG CCGCCTGGCT GGGCTTCCTC GACCTGCTCA AGACCCAGCG CAAGCGCCGC
CCCATCGATG GCGCGTTCAT CGCCATCAGC CTTTCCGACC TGCTGCTGGG CAGCGACGCC
GAGCGCGCCG CCCATGCCCA GGCGATCCGC GCGCGCATCC AGGAGCTGTA CCAGCAGCTC
GGGGTGCGCT TCCCGATCTA CGTGATGCTG ACCAAGTTCG ACCTGGTGCC GGGCTTCATG
GAGTTCTTCG ACAGCCTGAA CCGCGAGGAA CGCGCGCAGG TCTGGGGGAT GACCTTCGCC
CTCGACGACG GCAAGAGCGC GGAAGGCCCG CTGGCGGTGT TCGACAGCGA ATTCGCCCTG
CTCGAACAGC GTCTCACCGC GCGCCTGGTG GAACGCCTGC AGCAGGAGCG CGACCCGGCG
CGGCGCGACC TGGTCTACGG CTTCCCGCAG CAATTCGCCG CCCTGCGCGA ATGCCTCGGC
GAGTTCCTCA ACGGCGTGTT CAAGCCCAAC CCCTACGAGG AACGCCCGCT GTTGCGCGGC
CTGTACTTCA CCAGCGGAAC CCAGGAAGGC AGTCCGATCG ACCGCCTGAT CGGCAGCATG
GCGCAGTCGA TGAACCTCGA CCGCCAGCAC CTGGCGCGGC AGACCGGAAC CGGGCGCAGC
TACTTCATCG AGCGGCTGTT CCGCGAAGTG GCGTTCGGCG AACGCGGCCT GGTCGGCACC
AACCCGAAGG TCGAGCGCCG CCGCAAATGG CTGACCATCG GCGCGCTGAG CGCCACCGCG
CTGGTGGTGC TGGCGGTGAC GGCGGTATGG ATCGCCAGCT ACCGCGCCAA CCAGAGCTAC
ATCGCCGCGG TCGACCAGCG CGTCGACCCG CTGGCGCGCG GCATCGAGTC GCTGAGCCCG
GCCCAGCGCG ACGTCCTGGC CGTACTGCCA CAGCTCAACG CGGTGCAGAA TCTCGCCGGC
GACGCGCCAA GCTGGGCCGA AGGCTACGGG CTGTACCAGG GCGACATGCT CGGCGAGGAG
TCCGCCAGCG TCTACCGCAA GCTGCTGATC GCGGTGTTCG CCCCGCGCCT GGTGACCCGC
ATCGAGGAAC AGTTGCGCTC CGGCGGCAGC AGCGATTTCC TCTACGAGGG CCTGAAGGCC
TACCTGATGC TCGGCAGCCC GGACCATTAC GACGCCGACT TCATCAAGGC CTGGATCAGC
CTCGACTGGG AACGCAACCT GCCGCGCGAC CTCTCGCCGG AACAGCGCCA GGCGCTGCAC
GCGCACCTCG ACGCGTTGCT CGAACGACGG CCGCCGTCGG CGCGCCTGGA CCAGGACCTG
GTCGAGGACC TGCGCCGCCA GTTGCAGCAA CTACCGGTGG CGCAGCGGGT CTACGACCGG
GTCAAGCGGC AGAGGCTGCC CAAGGACGTG CCCGACTTCC GCATCAGCGA CGCCGCCGGC
CGCGACGCAC CGCTGGTGTT CGCGCGCAAG AGCGGCAAGC CGCTCACCGA CCCGCTCAGC
GGCTTCTTCA CCTACCGCGG CTATCGCGAG GTGTTCCTCA CCGCCAGCCT CAGCCAGGCC
GGCACCATCG CCGAGGAACA GTGGGTGCTC GGGCGCGACC TGAACGATGC CGGCGATGCC
GCCAACCTGG CCCTCGACGT GCGTCGCCTG TACTTCCAGG ACTACCTGCG GCAATGGGAC
GACCTGCTCG CCGACCTCAC CGTGGTGCCG ATCACCAACG TCACCCAGGC CGCCGACGTG
CTGCGCATTC TCTCCGGGCC GACCTCGCCG TTCCGCAAGC TGCTCGAGGC GGTGGCCCGC
GAGACCGACC TGCAGAAGGG CGACCGGCTG GTCGCCGCGC AAGTGAAGAA GGCCGCCGAC
GGCACCGTGG ACAAGCTCAA GCAGCGCCTC GGCTCGCTGG TCGGCCAGGA GGAGGAGGAA
GGCGCCCGCG AACAGCCGCA GCAGGCCGAC AGCGACCCGA TCAGCGCCCA CTTCGCCGAA
CTCAACAGCC TGGTCAGCAA GGGCGAGGGC GGCAACGAGC CGGCGCCGAT CGACAGCCTG
CTGGAGGACA TGAACGCGCT CTACGTACAG GTCAGCGCCA TGGCCGGAGC CAGCGGCGAC
TCGCTGCTCG GCGACGCCAA GAACCAGGTG GCCGCCGCCG CCTCGCGCGT GGCCCTCAGC
GCCGAGCGCC AGCCGCCGGT GGTCCAGGGC CTGGTGAAGA ACGTGGTCAA CTCCACCACC
AGCAGCATGA TGGGCAGCGT GCGCAACCAG CTCAACGCGG CCTGGATCAG CGACGTGGTC
AGCGTCTACC GGCAGTCCCT GGCCGGGCGC TACCCGATCG CCGCCGGCAG CTCGCGCGAC
GCCACCCTGG AAGACTTCGG CCACTTCTTC GGTGCCGGTG GGGTGATGGA CAGCTACTTC
CGCCAGTACC TGCAACCCTA CGTCGACACC TCCGCCAGCA CCTGGCGCTG GCAGCCCGGC
GCGGCGCAGA AGCTCGGCAT CAACCCCGGC GTGCTGCACA CCTTCCAGCG CGCGGCGGCG
ATCCGCGACG CCTTCTTCCG CTCCGGCGGC ATGCAGCCGG CGGTGCGCTT CGAACTCAAG
CCGGTGACCA TGGACGCGGC GATCAGCCAG TTCATCCTCG ACCTCGACGG CCAGCAGCTG
ACCTACGACC ACGGCCCCGC CCGCCCGGTG GCGATGCAGT GGCCGAGCGC CAACGGCCTC
GGCGTGGTCC GCCTGACGGT GACGCCGCCG CCCAGCAGCG GCCGTTCCGG CCTGACCCTG
GAGGGCCCCT GGGCCTGGTT CCGCCTGCTC GACCAGTCGG ACCTGGAACG CGGCAACTCG
CCGGACCGCT TCACCCTGCG GCTGCGCATC GACGGCTCCA GCATCGCCTG CGAGCTGCGC
GCCAGCAGCG CCTTCAACCC CTTCAAGAGC CGGGTCGTGT CCGGCTTCAG CCTCCCGGAG
CGCCTTTGA
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| Protein sequence | MQSLAEVSAP DAASVATAEE LATLKQRMDE ALALLKRAKL GGSERRNLYE LPWYVIIGPP
GSGKTTALMN SGLDFPLAAQ MGAGAIRGVG GTRNCDWWFT DEAVLLDTAG RYTTQDSHAQ
VDKAAWLGFL DLLKTQRKRR PIDGAFIAIS LSDLLLGSDA ERAAHAQAIR ARIQELYQQL
GVRFPIYVML TKFDLVPGFM EFFDSLNREE RAQVWGMTFA LDDGKSAEGP LAVFDSEFAL
LEQRLTARLV ERLQQERDPA RRDLVYGFPQ QFAALRECLG EFLNGVFKPN PYEERPLLRG
LYFTSGTQEG SPIDRLIGSM AQSMNLDRQH LARQTGTGRS YFIERLFREV AFGERGLVGT
NPKVERRRKW LTIGALSATA LVVLAVTAVW IASYRANQSY IAAVDQRVDP LARGIESLSP
AQRDVLAVLP QLNAVQNLAG DAPSWAEGYG LYQGDMLGEE SASVYRKLLI AVFAPRLVTR
IEEQLRSGGS SDFLYEGLKA YLMLGSPDHY DADFIKAWIS LDWERNLPRD LSPEQRQALH
AHLDALLERR PPSARLDQDL VEDLRRQLQQ LPVAQRVYDR VKRQRLPKDV PDFRISDAAG
RDAPLVFARK SGKPLTDPLS GFFTYRGYRE VFLTASLSQA GTIAEEQWVL GRDLNDAGDA
ANLALDVRRL YFQDYLRQWD DLLADLTVVP ITNVTQAADV LRILSGPTSP FRKLLEAVAR
ETDLQKGDRL VAAQVKKAAD GTVDKLKQRL GSLVGQEEEE GAREQPQQAD SDPISAHFAE
LNSLVSKGEG GNEPAPIDSL LEDMNALYVQ VSAMAGASGD SLLGDAKNQV AAAASRVALS
AERQPPVVQG LVKNVVNSTT SSMMGSVRNQ LNAAWISDVV SVYRQSLAGR YPIAAGSSRD
ATLEDFGHFF GAGGVMDSYF RQYLQPYVDT SASTWRWQPG AAQKLGINPG VLHTFQRAAA
IRDAFFRSGG MQPAVRFELK PVTMDAAISQ FILDLDGQQL TYDHGPARPV AMQWPSANGL
GVVRLTVTPP PSSGRSGLTL EGPWAWFRLL DQSDLERGNS PDRFTLRLRI DGSSIACELR
ASSAFNPFKS RVVSGFSLPE RL
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