Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_00850 |
Symbol | |
ID | 4380419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 82730 |
End bp | 83929 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639322627 |
Product | hypothetical protein |
Protein accession | YP_788228 |
Protein GI | 116053793 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0095739 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCCG GCCTGCTGCT CTCGCTGGCC TGGGCCGACT ATCGCGGCGA GGCGCGCCTG TCGCTCTGCG CGATCTTCGC CCTGGCGGCG GTGATCACCC CGCTGCTGGT GCTGTTCGGC CTCAAGTACG GCCTGGTCAG CACCCTCACC GAGCGGCTGG AGCGCGCGCC TTCGGTGCGC GAGATCATTC CGGTCGGCGG CGCCCGCTAC CGTGCCGAGG ACATCGCCGC CCTGGCCGCA CGCGCGGATG TCGCCTTCGC CGTGCCGCGC ACCCGGCAGA TCGCCGCCAC CGCCGACCTC AGCGGCGGCG GCGAGACCGC CCTGAGCGTC GAGATGATTC CCAGCGCCGC CGGCGACCCG CTGCTGGCCG GCCTGCCGCA ACCCGACCGG CCGACCCGCG TGGTGCTCAG CCACGGCGCC GCGGAAAAAC TCGGCGCCCA GCCTGGCGAG CGCATCGTCG CGCGCATCGG CCGGCGCATG GATGGCCAGG CACAGAGCCA GCGCCTGGAG CTGGAAGTGC TCGCGGTGCT GCCGCAGGAG CGTTTCGCCC GCGACGCGCT GTTCGCCCCG CTAGCCCTGC TGGAAGCCGC CGAGGACTAT CGCGACGGTC GCGCGGTGGC CGCCTACGGC TGGCCGGGGA AGGCCGGCGA GACCCCGCGC GCACGCATCT ACCCGGGCTT CCGCCTGTAC GCCCGAGACC TCGATGCGGT GGAAGGGCTG CGCCGGCACT TCGTCGCGAG TGGCGTGGAA GTCGCCACCC AGGCCGAGGC CATCGCCCAG GTGCGCAGCC TCAGCCGCAA CCTCGGCCTG GTGTTCTGGA TCGTCGCCGC GCTGGCCATC GGCGGTGCCT TCGCGGCCAT CGCCGCCAGC AGCCTGGCCG CCGTCGAACG CAAGCGCCGC GCCCTGGCGG TGCTGCGTCT GCTGGGCTTC CCGACCGCCG CGCTGGTCGG CTTCGTCATG TTCCTGGCGC TGTTCAGCGC CGTCTTCGGC CTGTTCCTCG CCGGGCTGCT GTACGCCGCC ACGGCCGGCG CGCTGAACCA CCTGTTCGAC AACCAGAGCG GCGAGTTCGT CTGCCGCCTG CTGCCCAGCC ACTACCTGAC GGCGCTGCTC GCCACGCTGC TGTGCAGCGT CCTGGCCGCC GCCAGCGGCG GCTGGCGCGC GGCGCGGATC GAAGCCGCAG AGGGATTACG CGATGTTTGA
|
Protein sequence | MRAGLLLSLA WADYRGEARL SLCAIFALAA VITPLLVLFG LKYGLVSTLT ERLERAPSVR EIIPVGGARY RAEDIAALAA RADVAFAVPR TRQIAATADL SGGGETALSV EMIPSAAGDP LLAGLPQPDR PTRVVLSHGA AEKLGAQPGE RIVARIGRRM DGQAQSQRLE LEVLAVLPQE RFARDALFAP LALLEAAEDY RDGRAVAAYG WPGKAGETPR ARIYPGFRLY ARDLDAVEGL RRHFVASGVE VATQAEAIAQ VRSLSRNLGL VFWIVAALAI GGAFAAIAAS SLAAVERKRR ALAVLRLLGF PTAALVGFVM FLALFSAVFG LFLAGLLYAA TAGALNHLFD NQSGEFVCRL LPSHYLTALL ATLLCSVLAA ASGGWRAARI EAAEGLRDV
|
| |