Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_00550 |
Symbol | |
ID | 4381737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 55575 |
End bp | 56984 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639322599 |
Product | hypothetical protein |
Protein accession | YP_788200 |
Protein GI | 116053765 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0250309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0752819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCTAC ACCGGGGCGG AGAACCCGAT GGATACCGGC GGCAGCGCCG GCCTCATGGC GGACGGCGTA CCACCGTGCA GGCACCTCGG GGTCGTCTGC TGCTATGGTG CGCACAGGCA CGTCGCCATC CTCTCTCCCG GCGAATGGAA TCGAGCATGA CGCTTTCCCT GGATCTGTTG TTGAGCCTGT GCACGGCCCT GGCCATCGGC CTTCTGATCG GCGCCGAGCG CGGCTGGCAA GAGCGCGACC ACGAAGATGC GCGGCAGATC GCCGGAATCC GCACCTTCAG CCTGGCCGGC CTGCTCGGCG GCTTCGCCAC CCTGCTCGCG GGCGAACTGG GCAGCGCAGT CTGGGTAGCC TTGCTGCTGG CCCTCGCGGC GCTGGCCGTG GCCGGCTACG TGAGCGACGT CAGGCGTGGC GGCGACCAGG GCATGACCAC CGAGATCGCC CTACTGATGA CCTTCCTCCT CGGCAGCCTC GCCCTCACCG AACAGCGCCT GCTGGCTGCC GCCGGCGGCA TCGTGCTGAC CCTGCTGCTG AGCCTCAAGG ACAAGCTCCA CGCCCTGCTG AAGCGCCTGA CCGCCGAGGA ACTGTCGGGC ACCCTCAAGC TGCTGTTCAT CTCCGTGGTC CTGCTGCCGG TGCTGCCCAA CCAGGGCTAC GGTCCCTGGG CGTTCTTCAA TCCCTACCTG ACCTGGTGGA TGGTGGTGCT GATCGCCGCC CTCGGTTTCT CCGCCTACCT GGCCATCCGC CTGATCGGCT CGCGCAAGGG CCTGTTGCTG ACCGCGGTGC TCGGCGGCCT GGTGTCCTCC ACGGTGATGA CCCTGACCCT GGCGCGCCTG CGCGAGCGCA TGCCCGACGC CCTGTTGGCG TGCGCCCTGC TGGCGACCTC GGCGCTGATG TTCCCGCGCA TCCTCGTCGA GATCGGCGCG ATCCACCCGG CCTTGCTGAA GGAACTGGTC CTGCCATTCG CCGCCACCAC CCTCGTCTAC CTTGGCGGCA CGCTGTTCCA CGCCCTGCGC GGCGGCCGCG CCAGCCAGGA GGCGCCCGAC GAGCCAGGCC TGCGCAACCC CTTCGAACTG CTCCCGGCCC TGCGCTTCGC CGCCCTGCTG AGCGCGATCC TGCTGTTGGT GGAGGTCGGC CGGCGGCTGT TCGGCGATGC CGGCATCTAT GCGGTCGCGC TGCTCTCCGG CCTCGCCGAC GTCGACGCGA TCACCCTGTC CCTGGCCCGC GCGGCGCAGG GCGAACTCGA TCCAGGCGTG GCCAGCCGCG GCATCGCCCT TGCCGCCCTG AGCAACAGCC TGGTCAAGGC CGGCCTGATC GTGCTGGTGG GCGGCAAGCG GCTGGCCCTG CAAACGCTAC CCTTCAGCCT GGCGGGGCTG CTGGTAGGAG CGCTGCTGAT CCTGCTGTGA
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Protein sequence | MRLHRGGEPD GYRRQRRPHG GRRTTVQAPR GRLLLWCAQA RRHPLSRRME SSMTLSLDLL LSLCTALAIG LLIGAERGWQ ERDHEDARQI AGIRTFSLAG LLGGFATLLA GELGSAVWVA LLLALAALAV AGYVSDVRRG GDQGMTTEIA LLMTFLLGSL ALTEQRLLAA AGGIVLTLLL SLKDKLHALL KRLTAEELSG TLKLLFISVV LLPVLPNQGY GPWAFFNPYL TWWMVVLIAA LGFSAYLAIR LIGSRKGLLL TAVLGGLVSS TVMTLTLARL RERMPDALLA CALLATSALM FPRILVEIGA IHPALLKELV LPFAATTLVY LGGTLFHALR GGRASQEAPD EPGLRNPFEL LPALRFAALL SAILLLVEVG RRLFGDAGIY AVALLSGLAD VDAITLSLAR AAQGELDPGV ASRGIALAAL SNSLVKAGLI VLVGGKRLAL QTLPFSLAGL LVGALLILL
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