Gene PA14_00030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_00030 
SymbolrecF 
ID4384101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3169 
End bp4278 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content61% 
IMG OID639322557 
Productrecombination protein F 
Protein accessionYP_788158 
Protein GI116053723 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA CCCGCGTTTC GGTCACCGCG GTGCGCAACC TGCACCCGGT GACCCTCTCC 
CCCTCCCCTC GCATCAACAT CCTCTACGGC GATAATGGCA GCGGCAAGAC CAGTGTGCTC
GAAGCCATCC ACCTGCTGGG CCTGGCGCGT TCATTCCGCA GTGCGCGCTT GCAGCCGGTG
ATCCAGTATG AGGAAGCGGC CTGCACCGTA TTCGGCCAGG TGATGTTGGC CAACGGCATC
GCCAGCAACC TGGGGATTTC CCGTGAGCGC CAGGGCGAGT TCACCATCCG CATCGATGGG
CAGAACGCCC GGAGTGCGGC TCAATTGGCG GAAACTCTCC CACTGCAACT GATCAACCCG
GACAGCTTTC GGTTGCTCGA GGGAGCGCCG AAGATCCGCC GACAGTTCCT CGATTGGGGA
GTGTTCCACG TGGAACCTCG GTTTCTGCCC GTCTGGCAGC GCCTGCAGAA GGCGCTGCGC
CAGCGGAACT CCTGGCTCCG GCATGGTAAA CTGGACCCCG CGTCGCAAGC GGCCTGGGAC
CGGGAATTGA GCCTGGCCAG CGATGAGATC GATGCCTACC GCAGAAGCTA TATCCAGGCG
TTGAAACCGG TATTCGAGGA AACACTCGCC GAATTGGTTT CACTGGATGA CCTGACCCTT
AGCTACTACC GAGGCTGGGA CAAGGACCGG GACCTCCTGG AGGTTCTGGC TTCCAGCCTG
TTGCGCGACC AGCAGATGGG CCACACCCAG GCGGGACCGC AGCGTGCGGA TCTTCGCATA
CGGTTGGCAG GTCATAACGC CGCGGAGATT CTCTCGCGCG GTCAGCAGAA GCTGGTGGTA
TGCGCCCTGC GCATCGCCCA AGGCCATCTG ATCAATCGCG CCAAGCGCGG ACAGTGCGTC
TACCTGGTGG ACGACCTGCC CTCGGAATTG GATGAGCAGC ATCGAATGGC TCTTTGCCGC
TTGCTTGAAG ATTTGGGTTG CCAGGTATTC ATCACCTGCG TGGACCCGCA ACTATTGAAA
GACGGCTGGC GCACGGATAC GCCGGTATCC ATGTTCCACG TGGAACATGG AAAAGTCTCT
CAGACCACGA CCATCGGGAG TGAAGCATGA
 
Protein sequence
MSLTRVSVTA VRNLHPVTLS PSPRINILYG DNGSGKTSVL EAIHLLGLAR SFRSARLQPV 
IQYEEAACTV FGQVMLANGI ASNLGISRER QGEFTIRIDG QNARSAAQLA ETLPLQLINP
DSFRLLEGAP KIRRQFLDWG VFHVEPRFLP VWQRLQKALR QRNSWLRHGK LDPASQAAWD
RELSLASDEI DAYRRSYIQA LKPVFEETLA ELVSLDDLTL SYYRGWDKDR DLLEVLASSL
LRDQQMGHTQ AGPQRADLRI RLAGHNAAEI LSRGQQKLVV CALRIAQGHL INRAKRGQCV
YLVDDLPSEL DEQHRMALCR LLEDLGCQVF ITCVDPQLLK DGWRTDTPVS MFHVEHGKVS
QTTTIGSEA