| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6568 |
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| Symbol | |
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| ID | 4315472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1252995 |
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| End bp | 1254095 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638154412 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_778446 |
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| Protein GI | 115361309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.214678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTTT CCGACGCGCC GGCGATCGAC GACGTGCGCG CCCGCGCCTA CCGCGTGCCG
ACCGACCGGC CCGAAGCCGA CGGCACCTAC GCATGGCACG CGACGACGAT CGTCGTCGTC
GAGGTCGATG CGGGGCCCGT GACGGGGCTC GGCTACACGT ACACCGATGC GAGCGCCGCG
CTGCTCGCGA AGTCGATGCT GGCCGACGTG CTGCGCGAGC GGCCGCTCGT CGATATCCCG
GCCGCCGTCG ACGCGCTGTG GCGCGCGGTG CGCAACGTCG GGCGGGCCGG CGTGGCGGCG
ACCGCGATCT CCGCACTCGA CGTCGCGCTG TGGGATGCGA AGGCGAAGCT CGCGGGCGTG
CCGCTCGCGA TCCTGCTTGG CCGCGTGCGC GAACGCGTGC CCGTGTACGG CAGCGGCGGC
TTCACGACCT ACGACGACGC GACGCTCGCC GCGCAGCTCG ATGGCTGGCG CAATGAAAAT
ATCCGCGCGT GCAAGATCAA GATCGGCGCG CAGGATGCGC GCGATCCGTC GCGCGTGCAG
GTCGCGCGCG CCGCGCTCGG CCCCGACGTC GACCTGTTCG TCGACGCGAA CGGCGCGTAT
GCGGCGCGCA CCGCGCTCGC GTTTGCGGAG ATGGTGAGCG ATTGCGCGAT CCGCTGGTTC
GAGGAGCCGG TCAGCAGCGA CGATATCGAC GGCCTGCGCT TCGTGCGCGA GCACGTCGGC
GCGCGCGTCG ACGTCGCGGC CGGCGAGTAC GCGTATACGC CCGACGACTT CCGGCGCCTG
CTCGAAGGCC GCGCGGTCGA CGTGCTGCAG GCCGATGCGA CACGCTGCGG CGGCGTCAGC
GGCTTTCTCG CGGCCGCCGC GCTGGCCGAT GCGCATCACG TCGACCTGTC CGCGCATTGC
GCGCCGGCGC TGCATCGGCA CGTCGGCTGC GTCGCGCCGC GCATGCGCCA CGTCGAATGG
TTCCACGATC ACGTGCGGAT CGAGCGAATG ATGTTCGACG GCGCGCCAAC CGTCGTCGAC
GGCGCACTGG AGATCGATGC CGCGCGCCCC GGGCTCGGCC TCGAGCTACG CGAGGCCGAC
GTCGCGCAGT TCGCGATCTG A
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| Protein sequence | MALSDAPAID DVRARAYRVP TDRPEADGTY AWHATTIVVV EVDAGPVTGL GYTYTDASAA
LLAKSMLADV LRERPLVDIP AAVDALWRAV RNVGRAGVAA TAISALDVAL WDAKAKLAGV
PLAILLGRVR ERVPVYGSGG FTTYDDATLA AQLDGWRNEN IRACKIKIGA QDARDPSRVQ
VARAALGPDV DLFVDANGAY AARTALAFAE MVSDCAIRWF EEPVSSDDID GLRFVREHVG
ARVDVAAGEY AYTPDDFRRL LEGRAVDVLQ ADATRCGGVS GFLAAAALAD AHHVDLSAHC
APALHRHVGC VAPRMRHVEW FHDHVRIERM MFDGAPTVVD GALEIDAARP GLGLELREAD
VAQFAI
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