Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6559 |
Symbol | |
ID | 4315463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | - |
Start bp | 1243711 |
End bp | 1245315 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638154403 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_778437 |
Protein GI | 115361300 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.830295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGC CGTCCGACCG GCCGCCCAAC GGGGCCTCTT CGTCCGGCGG CGCGTGGCGG CCCGCCGCGA ACCCGTGGGT CATCGCGATC GTCGTCACGC TCGCCGCGTT CATGGAGGTG CTCGACACGA CGATCGTCAA CGTCGCGCTG CCGCATATCG CCGGGACGAT GTCGGCGAGC TACGACGAGG CGACCTGGAC GCTCACGTCA TACCTCGTCG CGAACGGCAT CGTGCTGCCG ATTTCCGGCT TCCTCGGGCG CCTGCTCGGC CGCAAGCGCT ACTTCCTGCT GTGCATCGCC GCGTTCACCG TGTGCTCGTT CCTGTGCGGC GTCGCGACCA ACCTGGGCGA ACTGATCGTG TTCCGCGTGC TGCAGGGCCT CTTCGGCGGC GGGCTGCAGC CGAACCAGCA GTCGATCATC CTCGACACGT TTCCGCCCGA ACAGCGCAAC CGCGCGTTCT CGATCTCGGC GATCGCGATC GTCGTCGCGC CGGTGCTCGG GCCGACGCTC GGCGGCTGGA TCACCGATCA TTTCTCGTGG CGCTGGGTGT TCCTGCTCAA CGTGCCGATC GGCGCGCTGA CCGTGCTCGC GGTGATGCAG CTCGTCGAGG ATCCGCCGTG GCGACGCGGC GCCGAGCGCG GGATCTCGGT CGACTACATC GGCATCGGGC TGATCGCGAT CGGGCTCGGC TGCCTGCAGG TGATGCTCGA TCGCGGCGAG GACGAGGACT GGTTCGGATC GAACTTCATC CGCGTCTTTG CGGTGCTGTC GGCACTCGGC CTGATCGGCG CGACGCTGTG GCTGCTGCGT GTGAAGAAGC CGGTGGTCGA TCTGTCGTGC CTGCGCGACC GCAACTTCGC GCTCGGCTGC GTGACCATCG CGACGTTCGC GGCCGTGCTG TACGGCAGCG CGGTGATCGT CCCGCAACTC GCGCAGCAGC ACCTCGGCTA TACGGCGACG CTCGCGGGCC TCGTGCTGTC GCCCGGCGCG TTGCTCATCA CGCTGGAAAT CCCGCTCGTG AGCCGGCTGA TGCCGCACGT GCAGACGCGC TATCTGGTCG GCTTCGGTTT CGTGCTGCTG TCGGTCGCAC TCGTCTATTC GCGGCTGCTG GTGCCGGACA TCGATTACCG GCACCTGGTG ATGATCCGCT GCGCGCAGTC GCTCGCGATC GGCTTCATGT TCGTGCCGAT CACGACGCTC GCGTACCTGA CCGTCCCGCA GCGGCTCAAC GACGACGCCT CCGCGCTGTT CACGATGTTC CGCAACGTCG CGGGCTCGAT CGGCATCTCG GTGTCGACCG CGCTGATCCG CGAGCGGACG CAGGCGCGCA TGGCGCACCT GTCCACGCAC ATGTCGCCGC TGTCGCAGAA CTTTCAGGAC GCGCTGCACG AGAACGCGCG CGCGATCGGC GCGCTGTCGG GCGTGCCGCC GCCGGCCGCG CTGCAAACCG CGACCGGCCG GCTGTACGAG ACGTTCATCT CGCAGGCGAC GATCCTCGCG TATATCGACG TGTTCGCGAT CCTCGCGGTG TTCTGCGCGT TCAGCATTCC GCTGACGTTC CTGTTCTCGC CGGTGAAGGC CGCACGCGGC GCGGGAGGGC ATTGA
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Protein sequence | MNRPSDRPPN GASSSGGAWR PAANPWVIAI VVTLAAFMEV LDTTIVNVAL PHIAGTMSAS YDEATWTLTS YLVANGIVLP ISGFLGRLLG RKRYFLLCIA AFTVCSFLCG VATNLGELIV FRVLQGLFGG GLQPNQQSII LDTFPPEQRN RAFSISAIAI VVAPVLGPTL GGWITDHFSW RWVFLLNVPI GALTVLAVMQ LVEDPPWRRG AERGISVDYI GIGLIAIGLG CLQVMLDRGE DEDWFGSNFI RVFAVLSALG LIGATLWLLR VKKPVVDLSC LRDRNFALGC VTIATFAAVL YGSAVIVPQL AQQHLGYTAT LAGLVLSPGA LLITLEIPLV SRLMPHVQTR YLVGFGFVLL SVALVYSRLL VPDIDYRHLV MIRCAQSLAI GFMFVPITTL AYLTVPQRLN DDASALFTMF RNVAGSIGIS VSTALIRERT QARMAHLSTH MSPLSQNFQD ALHENARAIG ALSGVPPPAA LQTATGRLYE TFISQATILA YIDVFAILAV FCAFSIPLTF LFSPVKAARG AGGH
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