| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6553 |
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| Symbol | |
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| ID | 4315457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1238783 |
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| End bp | 1239619 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638154397 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_778431 |
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| Protein GI | 115361294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG ATCGAATTTC CTATGACGCA TTCGTGCGGT TTCTGGCAAT GCCATTGAAC
GACGGCCGCC CGTTCGTGCT CGAGACCAAG CACACGGTCT CGCTGCACTT CGACCACTTC
GGCACGCAGA GCTTCATGTC GCTGAAGGAT CCGGTCCGGC TCGAACTCGG CTATACGCGC
GTGATGATGG GTTTCCTGCT GCTGCAGCCG GCGCCCGCGC GCATCTGCAT GATCGGGCTC
GGCGGCGGGT CGCTGGCGAA GTACTGCTAT CGGCACCTGC CCGATACGGC GATCGACGCG
GTCGAGATCA ACCCGGACGT AATCGCGCTG CGCGACGTGT TCAGGATTCC GCAAGACGAC
GCGCGCTTCG CCGTGATCTG CGCGGATGGC GCGGACTACG TCGGCCGGCC GGAGGTCAAG
GCCGACGTGA TCCTGCACGA CGCGTTCGTC GCCGACGGCA TGCCGGGCCG CTGCACGGGC
GCCGCCTTTT TCGACGCGTG CCGTGCGCGG CTGAGCGAAA CGGGCGTGCT CGCGATCAAT
TTCATGGACG ACGATCCGGC GTTGCCGCGG CATCTCGCGC AATTGCGCGA GGTGTTCGAC
GCTTCGTATG CGCTGCTGCC GTGCGGCGAC GACAACAACT TCATCGCGTT CGCGTGGAAG
AACGGCAACC CGCTGCCGTC GCTGCGCATC CTGCTCGAAC GCGCGCTGGG GTTCGCGTCG
GCCGGCGAGC TCAAGCTGTC GCCCACCGCC CGGCGCATGA AGGAAGGGGA GGGCATCGCT
CCCGAGCGGC TCGTGTGGCG CGCGCGTGAA CACCCGCGAT GGGAAATCTG CACCTGA
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| Protein sequence | MSEDRISYDA FVRFLAMPLN DGRPFVLETK HTVSLHFDHF GTQSFMSLKD PVRLELGYTR
VMMGFLLLQP APARICMIGL GGGSLAKYCY RHLPDTAIDA VEINPDVIAL RDVFRIPQDD
ARFAVICADG ADYVGRPEVK ADVILHDAFV ADGMPGRCTG AAFFDACRAR LSETGVLAIN
FMDDDPALPR HLAQLREVFD ASYALLPCGD DNNFIAFAWK NGNPLPSLRI LLERALGFAS
AGELKLSPTA RRMKEGEGIA PERLVWRARE HPRWEICT
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