| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6544 |
|---|
| Symbol | |
|---|
| ID | 4315448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 1230811 |
|---|
| End bp | 1231410 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638154388 |
|---|
| Product | nitrile hydratase, alpha subunit |
|---|
| Protein accession | YP_778422 |
|---|
| Protein GI | 115361285 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01323] nitrile hydratase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.731828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA ACCACTCTGC AGAAACAGCA TCGACACCCG GCGAACGCGC CTGGGCGCTG
TTTCGCGTGA TGAAAGAGAA AAACCTGATC CCGGACGGCT ATATAGAAGG CCTGACGGAA
CTGATGTCGA CGACCTGGGA CCCGGCCAAC GGCGCGCGGA TCGTCGCGCG TGCGTGGGTC
GATCCGGGGT TTCGCGAGCT GCTATTGAAG GACGGTACCG CCGCGTGCGC GCAGTTCGGC
TACACCGGCC CGCAGGGTGA ATACATCGTC GCGCTCGAAG ATACGCCGAC GCTGAAGAAC
GTGATCGTCT GCAGCCTGTG CTCGTGCACG AACTGGCCGG TGCTTGGGCT GCCGCCCGAG
TGGTACAAGG GGTTCGAATA CCGCGCGCGG CTCGTCCGCG AGGGGCGCAC GGTGCTGCGC
GAACTCGGTA CCGACTTGCC CGACGACGTC GTCGTGAAGG TGTGGGACAC GACGGCCGAA
AGCCGCTACC TGGTGCTGCC CGTGCGTCCC GCCGGCACCG GGCACATGAC CGAGGAACAA
CTGCGAACGC TTGTCACGAA GGACGTGCTG ATCGGCGTCG CGCTACCGCG CGCGAGCTGA
|
|---|
| Protein sequence | MSANHSAETA STPGERAWAL FRVMKEKNLI PDGYIEGLTE LMSTTWDPAN GARIVARAWV
DPGFRELLLK DGTAACAQFG YTGPQGEYIV ALEDTPTLKN VIVCSLCSCT NWPVLGLPPE
WYKGFEYRAR LVREGRTVLR ELGTDLPDDV VVKVWDTTAE SRYLVLPVRP AGTGHMTEEQ
LRTLVTKDVL IGVALPRAS
|
|---|
| |