Gene Bamb_6539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6539 
Symbol 
ID4315443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1227052 
End bp1227336 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content68% 
IMG OID638154383 
ProductXRE family transcriptional regulator 
Protein accessionYP_778417 
Protein GI115361280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.625099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGC CCCAGTCCGT CGACACGATC GGCGCGCTCG CCCACCTCAT TCGCGCGACG 
CGGCTCCAGC AGGGGTTCAC GCGCGACGAA CTCGCGAACG CGACCGGGCT GTCGCCGAAA
TTCATCAGCC AGGTGGAAGC CGGCAAGCCG ACCGCGCAAA TCGGCAAGGT CATGCTGCTG
CTCGGCGAAC TCGGCGTGCG CCTGTACGCG GAATCGTCGG TCGAGATTTC GGAAGCCACC
GCGCTGAAGG CCGCGCAACG CCGCAGGAGC GGCCATGGCG GCTAG
 
Protein sequence
MSEPQSVDTI GALAHLIRAT RLQQGFTRDE LANATGLSPK FISQVEAGKP TAQIGKVMLL 
LGELGVRLYA ESSVEISEAT ALKAAQRRRS GHGG