| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6537 |
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| Symbol | |
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| ID | 4315441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1223747 |
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| End bp | 1225975 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638154381 |
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| Product | histidine kinase |
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| Protein accession | YP_778415 |
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| Protein GI | 115361278 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTG ACTCTCCCCT GCTGGAATCG GCCCTGATGC GGGCCGATCA TTTCGTGCAG
TTCTACGAAT CCGACGAGCA GCTCGTGTCG GAGGTCGCGT CGTTCGCGGC CGATGCGTTG
CGCGACGGCG GCAGCGCGAT CGTGATCGCC CGGGCCGACC GGCTCGCGGC GGTGCACGAA
CGCCTGGATG CGCTCGGCGC GGCAATCGGC CCGGGAGCCC GCGACCGGAT CTTCATGTCA
AGCGCGCAGG CGCTGCTCGA CAGCTTCATG GACGGCGACC TGCCCGATCC GGCGCGCTTT
CGCCGCTCGA TCGGCCCGAT CGTCGAAGCC GCGATCCGCG CGGGCCGCCC CGTGCATGCG
TTCGGAGAAA TGGTCTCGCT GCTGTGCGCG CAGGACCGGT ACGCCGGGGC CCTGCGACTG
GAAGCGTTAT GGGACGAACT GATCGCGCGG TACCGCTTCT CGCTCTACTG CGGCTATTCG
CATGACGCGT TTCCGAGCGC CGAGCAGTCG GAGATGTTCC GCCACGTGTG CTCGCTGCAC
CGCCGCATCC TGCCTGCCGC GTCGCTGCGC AACGACGAGA ACGAGCTGCA CCTGACACTG
GCGCTGTCCC AGCAACGCTC GCGCGCGCTG AGCGACGAGA TCCGCCGCCG CGAGGACGCC
GAACAGCAAC GCAACGGCGT CCTGATGCAT GCGCCGTTGC CGATCGCGCT GCTGTCGGGC
CCGGAGCACC GGATCGTGCT CGCGAATCAC CGTTTTTCCG CGCTGTGCGG CCGGACCGAC
ATCGTCGACC AGCCGCTGAC GTCGGTGCTG CCCGGCGGCG ATACGCCCGC GATCGTGCAG
GCGCTTGAAA CCGCCCGCGA GCAAGGCTGC TCGACGACGA TCGGCGAGCA CCACGACCGG
CCCGAACCGG ACGGCGCCGC CCGCGTGTAC CGGCTGCATT TCAATCCGCA GCCGCTCGCC
GAGGGGCTCG GCGTGATCGT CAGCGCGGTC GAGGTGACCG AGCACGTCGC CGCGCGCGAG
AAGCTCGTCG CCGCGAACGC CGAGCGCGAC CGGCTGCTGG GCGAATTGCG CGACGCGAAC
CAGGCGAAGG ACCAGTTTCT CGCGGTGCTC GGCCACGAGC TGCGCAATCC GCTGACGCCG
ATCTCGCTCG CGCTCGAGCT GATCCGCAAC CGCGACGGCC AGGCGACGCC GAACGAGATC
GCGATCATCC AGCGGCAGCT CGATCACATG GTCCGGCTGA TCGACGACCT GCTCGACGTG
TCGCGCATCA CGCGCGGCAA GATCACGCTG AAGAAAGAAT CCTTGCGGCT CGCGGACATC
GTCGATCGCG CGGTCGAGGT CGCCAGCCCG CTGCTCGAGC AGCGCCGCCA CCGCCTCCAT
GTCGACGCCG ATCCCGACGC GCGTTGCCAC GGCGACCCGG TGCGGCTGTC GCAGGTCGTC
GCGAACCTGC TGACCAATGC GGCGAAATAC ACGATGCCGG GCGGCGACAT CACCGTGCGC
GCGACGCACG GCGTGGACGG CGCCGCGATC ATCGAGGTCT GCGACAACGG CGCCGGCATT
CCGCCCGACC GCCTCGACAG CATCTTCGAG CCGTTCTACC GGCTCGACGG CGAAACGAAG
CAGGCGCACG GCGGCCTCGG CATCGGCCTC GCGCTCGTGC GCAGCCTCGT GAACCTGCAT
GGCGGCACCG TGCGCGCGGA CAGCGCCGGC CCCGGCTGCG GCAGCACATT TACGATCGCG
CTGCCCGAAT ACCGGCCGAA AGCCGTGGCG GTGGTCGCAC CGCAGCCGCC GCCGGGCATC
CGCGAGTTGG CGCCGGGCAG CACGGGCCGG CGCGTGATGC TGGTCGACGA CAACGAGGAT
GCCGCGTCGA CGCTCGCGCA ATGGCTGCGC GACGCCGGCC ACGAAGTCGC CGTCGTGCAC
GACCCGGTGA CCGCGCTGGC CGCCTACCGC GCGTACCGCC CCGACGTCGC GATCCTCGAT
ATCGGGCTGC CGGTGATGGA CGGCTACGAG CTGCTGCGGC GGCTGAAGGC GATCAACGAA
GTGACGACGT GCATGTTCCT CGCGCTGACC GGTTATGGCC GCAGCGCGGA TCGCGAGCGC
TGCCTCGCGA CCGGGTTCCT GCAGCATTTC GTGAAGCCGG TCGATCCGGC CGCGCTGCAT
CTCGCGATGA CGCTGCCCCG GCCGGGCGGC GATGCGCACG ACGGCACGGG CGCGGAAGCC
GGACGCTGA
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| Protein sequence | MTPDSPLLES ALMRADHFVQ FYESDEQLVS EVASFAADAL RDGGSAIVIA RADRLAAVHE
RLDALGAAIG PGARDRIFMS SAQALLDSFM DGDLPDPARF RRSIGPIVEA AIRAGRPVHA
FGEMVSLLCA QDRYAGALRL EALWDELIAR YRFSLYCGYS HDAFPSAEQS EMFRHVCSLH
RRILPAASLR NDENELHLTL ALSQQRSRAL SDEIRRREDA EQQRNGVLMH APLPIALLSG
PEHRIVLANH RFSALCGRTD IVDQPLTSVL PGGDTPAIVQ ALETAREQGC STTIGEHHDR
PEPDGAARVY RLHFNPQPLA EGLGVIVSAV EVTEHVAARE KLVAANAERD RLLGELRDAN
QAKDQFLAVL GHELRNPLTP ISLALELIRN RDGQATPNEI AIIQRQLDHM VRLIDDLLDV
SRITRGKITL KKESLRLADI VDRAVEVASP LLEQRRHRLH VDADPDARCH GDPVRLSQVV
ANLLTNAAKY TMPGGDITVR ATHGVDGAAI IEVCDNGAGI PPDRLDSIFE PFYRLDGETK
QAHGGLGIGL ALVRSLVNLH GGTVRADSAG PGCGSTFTIA LPEYRPKAVA VVAPQPPPGI
RELAPGSTGR RVMLVDDNED AASTLAQWLR DAGHEVAVVH DPVTALAAYR AYRPDVAILD
IGLPVMDGYE LLRRLKAINE VTTCMFLALT GYGRSADRER CLATGFLQHF VKPVDPAALH
LAMTLPRPGG DAHDGTGAEA GR
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