| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6532 |
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| Symbol | |
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| ID | 4315436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1218537 |
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| End bp | 1219370 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638154376 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_778410 |
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| Protein GI | 115361273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC AGTACGCGGT GATCGGCAAC CCGATCGGAC ACACGAAATC TCCGCTGATC
CACGGCATCT TTGCGGAAGC GACGCGGCAG GACCTGCACT ACTCGGCCAT CGAAGGGCCG
CTCGAGCCGG AAGGCGCGTT CGTCGACGTG GTGCGGGCAT TCGCCGCGCG CGGCGGCAAA
GGCATCAACA TCACCGCCCC GTTCAAGCTC CAGGCGTTCG CGATGTCGGA CGAACGCAGC
GAGCGCGCGT CGCTCGCCGG CGCGGCCAAT GCGCTGAAGT TCGAAGGCGG ACGCATCCTC
GCCGACAACT TCGACGGGAT CGGGCTCGTG CGCGACATCG AAATCAATCT CGGCCTGCCG
ATGGCCGGCA AACGCGTGCT GATGCTCGGC GCGGGGGGCG CGGCGCGCGG GGCGCTGCTG
CCGTTCCTCG CGGCCGGGCC GGCCGAGATG GTGATCGCGA ATCGCGACGT CGACAAGGCG
CGCGCACTGT CCGCGCAGGT CGCCGGACGC GGGCCGCTGG CGGCGTGCGG CTATGCCGAT
CTGGTCGCGA TGGGACGTTT CGATCTGGTG GTCAACGCCA CGTCGGCGAG CCTCGCCGGC
GATCTGCCGC CCGTCCCGCC GGGCGTGTTC AGCCCGACCG GGGCCGCATA CGAGCTTGCT
TACGGCAAGC GGCTGACGCC CTTTCTCCGG CTCGCACGCA ATGCGGGCGT GCACCGCGTC
GCGGACGGCG TCGGCATGCT GGTCGAGCAG GCCGCCGAAG CGTTCGCGTG GTGGCGCGGC
GTGCGCCCGG AGACGGCTAC CGTGATCGAA CGACTCACGG TCCCGCTCGA TTGA
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| Protein sequence | MTDQYAVIGN PIGHTKSPLI HGIFAEATRQ DLHYSAIEGP LEPEGAFVDV VRAFAARGGK
GINITAPFKL QAFAMSDERS ERASLAGAAN ALKFEGGRIL ADNFDGIGLV RDIEINLGLP
MAGKRVLMLG AGGAARGALL PFLAAGPAEM VIANRDVDKA RALSAQVAGR GPLAACGYAD
LVAMGRFDLV VNATSASLAG DLPPVPPGVF SPTGAAYELA YGKRLTPFLR LARNAGVHRV
ADGVGMLVEQ AAEAFAWWRG VRPETATVIE RLTVPLD
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