Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6526 |
Symbol | |
ID | 4315430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 1213031 |
End bp | 1214437 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638154370 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_778404 |
Protein GI | 115361267 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGA CTTTTCTCGG CGCGACCGAA ACCGTGACCG GCTCGAAGTA TCTGGTCGAG CACGGCAGCC GGCGCGTGCT GGTCGACTGC GGCCTGTTCC AGGGTACGAA GAACCTGCGG CTGCGCAACT GGCAGCCGCT GCCGCTCGCG CCCGACACGC TGGACGCGGT CGTGCTCACC CACGCGCATC TCGATCACTC CGGCTATCTT CCGGTGCTGG TGCGCGAAGG CTATCGCGGG CCGGTGTACT GCACGGCGGC CACGGCCGAG CTCTGCGACA TCATGCTGCG CGACAGCGCG CGGCTGCAGG AAGAGGAAGC CGACTTCGCG AACCGGCACG ATTATTCGAA GCATCGGCCG GCGCAGCCGC TTTACACGCT GGACGACGCG CAGCGCGCGC TGCGCCTGCT GAAGCCCGTT GCGTACGACG AATGCACGGC GCTCGGCGGC GGCGGCCTGT CGTTCCGCCT GCTGCCGGCC GGGCACATCC TTGGCGCGGC GAGCGTCGTG ATGCACTGGG ATCACAAGGT ACTCGCCTTC TCCGGCGATC TCGGCCGGTA TCACGATCCG ATCATGCAGC CGCCGCGGCC GCCCGCGCAT GCGGACTACG TCGTCGTCGA ATCGACGTAC GGCGACCGGC TGCACCCGGC GTCGGATCCG GAGAACGAGC TGGCTGCCAT GTTCGACAAG ACCTTCGCGC GCGGCGGGGT CGTCGTGATG CCCTGCTTCA CCGTCGGCCG CACGCAGGAA ATCCTGCACT ACATCGCGCG GCTGAAGGCG TCCGGCCGCA TGGCGCACGT CCCGGTCTTC CTCGACAGCC CGATGGCGAC GAACGCGACC GAGATCTATC GCCACCATAT CCTCGAACAT CGCCTGACCG TCTCCGAAGC GAACACGCTC GGCCATGCGG CGACGATGGT CCGCTCGGTC GACCAGTCGA AGGCGATCGC CGAACACCAT GGCCCGATGG TCATCATCGC CGGCAGCGGG ATGGCGACCG GCGGACGCGT GCTGCATCAC CTGAGCCGCT ATGCGCCCGA TGCGCGCAAC ACGATCGCGC TGGTCGGCTA CCAGGCCACC GGCACGCGCG GCGCGGCGCT GGCCGCGCAC GAGCCGACGC TGAAGATTCA CGGCGAGTAC GTCCGTCTGC GTGCGCAGGT CGAGTCGATC ACGGCGCTCT CGGCCCATGC CGACTACGAA GAGATCCTCA CGTGGCTCGG CACGATGCAG TGCGCCCCCG TCCGGACCTT CATCACGCAT GGCGAACCGG CTGCCGCGGA CGCGTTGCGG CGGCGTATTG CGGAGCGCCT GCAGTGGCCG TGCGAGGTGC CGGCTTACGA GCAATGCGTC GATCTGGACG AAGTCGCATC CGGCGGCGCG CAGGGATCCG CGGTGCTTTC GTCATAA
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Protein sequence | MKLTFLGATE TVTGSKYLVE HGSRRVLVDC GLFQGTKNLR LRNWQPLPLA PDTLDAVVLT HAHLDHSGYL PVLVREGYRG PVYCTAATAE LCDIMLRDSA RLQEEEADFA NRHDYSKHRP AQPLYTLDDA QRALRLLKPV AYDECTALGG GGLSFRLLPA GHILGAASVV MHWDHKVLAF SGDLGRYHDP IMQPPRPPAH ADYVVVESTY GDRLHPASDP ENELAAMFDK TFARGGVVVM PCFTVGRTQE ILHYIARLKA SGRMAHVPVF LDSPMATNAT EIYRHHILEH RLTVSEANTL GHAATMVRSV DQSKAIAEHH GPMVIIAGSG MATGGRVLHH LSRYAPDARN TIALVGYQAT GTRGAALAAH EPTLKIHGEY VRLRAQVESI TALSAHADYE EILTWLGTMQ CAPVRTFITH GEPAAADALR RRIAERLQWP CEVPAYEQCV DLDEVASGGA QGSAVLSS
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