| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6516 |
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| Symbol | |
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| ID | 4315420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1203408 |
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| End bp | 1204898 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638154360 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_778394 |
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| Protein GI | 115361257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.983833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.529285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAA CGGAGCGGAT CACGATGACG ATGCGCGAGC TGGACCGATT CAAGGTCATT
CAGGACGTGG CGGACGGCAA GCTCAAGCCA TGGCGTGCGG CAGAACGGCT GGAATTGACG
ACGCGGCAAG TTCGCCGGCT GGTCGCCCGG CTGCGTGAGC ATGGTCCGGC AGGTTTGGTG
TCGGGACACC GATCGAAGCC CGGCAACCGT CGCCTGGACC CAGGAGCCGC CGACCGGGTG
CTCTCGATCA TCCGCCACCG CTACGCCGAT TTCGGGCCGA CGCTGGCCTG CGAGAAGCTA
TGGGAATGCC ATGGCATTCG GCTGGCCAAG GAGACGGTCA GGAAGCTGAT GACGGACGCC
GGCTTGTGGA TTCCGCGCCG GCAACGACCG CCGAAGGTCT ACCAGCCGCG AGCGCGCCGG
GCATGCCTGG GCGAACTGAT CCAGATCGAC GGCAGCGACC ATCGATGGTT CGAGGAGCGT
GCGCCGGCGT GTACGCTGCT GGTGTATGTG GACGACGCGA CGAGCCGGTT GATGATGCTG
CACTTCACGC AGACCGAATC GACCTTCAGC TACTTCGAAG CGACGCGAGC GTACATCGAG
CGGCACGGCA AACCTGGGGC GTTCTATAGC GACAAGGCCA GCGTGTTTCG CAACGTGAAG
CCGGGCAAGA CCGGCAATCG CGTGACGCCG TTTGGCCGGG CGATGTACGA GCTGAACATC
GACACGTTCT GCGCGAACAG CAGTTCGGCC AAGGGGCGCG TGGAGCGAGC GCACCTGACG
TTGCAGGATC GATTGGTCAA GGAGATGCGA TTGCGCGGGA TCAACACGGT GGCCGACGCT
AACGCTTACG CGCCCTCCTT CATGGCCGCC TACAACGCAC GCTTCGCGAA GCCGCCGAAG
AGCGACTTCG ATGCGCATCG GCCGCTGCGG GCCGACGAGA ATCTGGACTT GGTGCTGACG
TGGCGCGAGC CGCGAAAGGT AACGAAGTCG CTCACGGTGC AGTACGACCG GGTGATGTAT
TTGCTGGATG ACACGCCGGC CAACCGGAAG CTGATCGACC GCCAGATCGA GGTATGGGAG
TACCCGGATG GGCGGATCGA AATCCGGGCT GATGGTCGTG TGTTGCCGTA CCGGCAATAC
GATCGCCTGG CTGAAATCGA TCAAGGTGCC GTCGTTGAGC ACAAGCGTTT GAGCCATGTG
TTGCAGGTCG CGCAAGCCCT TCAGGCGCAA CGCGATAACA GTCGAATCGG TAAAGCTCCG
TCTCGAACGC ATCGAGGCGA CTCAACCCGG ACCGACCGAA ACGAACCTCA TACGGGCAAG
AAGAAGCAAC GCGAGATCAC GCAGACCGAC GTCGAGCATG TGATCGTGGA TCTGGCGCAA
CGTAGGCAGA CCGCAAAGCC CTCAGACAAA CCTGGCCGCC GGTCTGCAAA AGCTGGAGAA
ACAAACGTGA GCGCCCTGCC CGTTCAAGCA CCGACCTTCG ACACTGCGTA A
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| Protein sequence | MAATERITMT MRELDRFKVI QDVADGKLKP WRAAERLELT TRQVRRLVAR LREHGPAGLV
SGHRSKPGNR RLDPGAADRV LSIIRHRYAD FGPTLACEKL WECHGIRLAK ETVRKLMTDA
GLWIPRRQRP PKVYQPRARR ACLGELIQID GSDHRWFEER APACTLLVYV DDATSRLMML
HFTQTESTFS YFEATRAYIE RHGKPGAFYS DKASVFRNVK PGKTGNRVTP FGRAMYELNI
DTFCANSSSA KGRVERAHLT LQDRLVKEMR LRGINTVADA NAYAPSFMAA YNARFAKPPK
SDFDAHRPLR ADENLDLVLT WREPRKVTKS LTVQYDRVMY LLDDTPANRK LIDRQIEVWE
YPDGRIEIRA DGRVLPYRQY DRLAEIDQGA VVEHKRLSHV LQVAQALQAQ RDNSRIGKAP
SRTHRGDSTR TDRNEPHTGK KKQREITQTD VEHVIVDLAQ RRQTAKPSDK PGRRSAKAGE
TNVSALPVQA PTFDTA
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