Gene Bamb_6511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6511 
Symbol 
ID4315415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1196739 
End bp1197527 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID638154355 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_778389 
Protein GI115361252 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.305352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.309603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGT CCTCGCGCTA TCAGTATCTG AATGTCGAAC AGCGGTCCTC CGGTGTCGCG 
ATTGTCACGA TGAATCGCCC GGAAATCCTG AACGCCATCA ATTGGGACAT GCACAGCGAG
CTGGAACGGG TGTTCGTCGA TCTGGATCAC GACAAATCGG TCAAGGCGAT CGTTTTGACC
GGCGCCGGCC GCGGTTTCTG CTCCGGCGGC GATCAGAAGT CGATCGACAA TGGCGATATC
CCGTCGGCGA CGCGCGGCGG CCGTCACCTC GTGAGAAACA TGCTCGAGGT CGAGGTGCCG
ATCGTGGCGG CGGTCAATGG CGTGGCCGTG GGTCTGGGCG CGACGCTCGC GCTGTTCTGC
GACATGATTT ATGCGAGCCC GACCGCACGG TTCGCCGATA CGCACGTCAA TGCCGGTGTC
GTTGCGGGCG ACGGCGGTGC GGTGATCTGG CCGCTTCTTC TCGGGCCGGT CCGCGCCCGG
CACTATCTGA TGACGGGAGA CTTCGTCAGC GCCGAGGAAG CGCTGACGAT GGGGATGATC
AACAAGATCG TAGAAAGCGA CAAGCTGCTG GAGGCGGCGA TCGATTACGC GGAACTGCTC
GCGAGCGGTC CGCGCGACGC GATCGTCTGG ACGAAATACT GCGTCAACAA GCTCATCAAG
CAGAATGCTC ATCTGCTTCT CGATACGTCG CTCGCTCTGG AGACGATCAC GTTCAATTCC
CCCGAGCGCC GCGAAGCGGT AGCTTCGTTT ACCGAAAGGC GCAAGCGCTT TGGAGACAAC
TGGAAATGA
 
Protein sequence
MNTSSRYQYL NVEQRSSGVA IVTMNRPEIL NAINWDMHSE LERVFVDLDH DKSVKAIVLT 
GAGRGFCSGG DQKSIDNGDI PSATRGGRHL VRNMLEVEVP IVAAVNGVAV GLGATLALFC
DMIYASPTAR FADTHVNAGV VAGDGGAVIW PLLLGPVRAR HYLMTGDFVS AEEALTMGMI
NKIVESDKLL EAAIDYAELL ASGPRDAIVW TKYCVNKLIK QNAHLLLDTS LALETITFNS
PERREAVASF TERRKRFGDN WK