Gene Bamb_6508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6508 
Symbol 
ID4315412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1193715 
End bp1194503 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content60% 
IMG OID638154352 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_778386 
Protein GI115361249 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.451547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.193137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC ACGAGACATC AGGTATGAAA ACCGACGAAT TGATTCGCAC ACACATCGAC 
ACGGACGTCG TGCGGCTGAC GATCAACCGG CCACCGGCAA ACGCACTGAG CGAACCGCTC
ATCACCGCAT TGATGTCCAT CTTCCGCGAC CTCGCTCAAC AAGACGTGCC ACCCGGCATC
GTGCTCACCG GGGCAGGAGA GAAGTTCTTT TGTGCCGGCG GCGATATCAA TGAAGTGGCG
GACCACGAGC TCGCCCTGTC GCGCATGGAA GCGTTCCACG CGTTCCTGGC GCAACTCGAG
CAGTATCCGA GCCCGCTCGT GTGCGCGGTC AACGGCTATG CAGTGGGTGC CGGATTCGAA
ATGGTGCTGC ATGCGGATTA CGTCGTCGCG TCCGCTGAAG CCCGGCTGGG ATTTCCCGAG
ATCAATCACG GCTTGTTGCC CGCGGCAAAA GGCATGCGCC ACGCGGCGGC CCTGCTGGGT
CGACGTGCCG CGCGTTCGCT GCTTTTTTCA GGCGAACTGA TCACTGCCGG AGAAGCGTTG
GCGATAGGTG CGGTGGACGC AATATCCGCG CGCGATGAAA CGCTGCGAGA CGCGCTGGCC
AAATGCCGCG AGCTTTGCAC CAAAGATCCC CAACTCTTCG CCGCCATCAA GCGAACGCTG
CGCGAGAGTC CACGGATGAA CGACGAAGCG CTGCTGCAGA TGACGCTCGA TGACCTGCGT
GGATATCTCG GTAACGCGCA GACCGCGGAC GCAAGATCCA GATTTCTGAA CCGCAACAAG
AAGGTCTGA
 
Protein sequence
MKIHETSGMK TDELIRTHID TDVVRLTINR PPANALSEPL ITALMSIFRD LAQQDVPPGI 
VLTGAGEKFF CAGGDINEVA DHELALSRME AFHAFLAQLE QYPSPLVCAV NGYAVGAGFE
MVLHADYVVA SAEARLGFPE INHGLLPAAK GMRHAAALLG RRAARSLLFS GELITAGEAL
AIGAVDAISA RDETLRDALA KCRELCTKDP QLFAAIKRTL RESPRMNDEA LLQMTLDDLR
GYLGNAQTAD ARSRFLNRNK KV