| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6506 |
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| Symbol | |
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| ID | 4315410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1191024 |
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| End bp | 1192661 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638154350 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_778384 |
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| Protein GI | 115361247 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00389964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.364964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA CGGCAGACAA TCCCTATACG ATCGGACTCG AGCGCGACCG GCCGAACTTC
ATTGCCTTGT CGCCGCTGAC GTTTCTCGAA CGCGCCGCGT CTGTCTGGCC GGAGCGCACG
GCCATCGTGC ACGGCACGAT TCGCCGCGAC TGGGCCGAAA CCTATCGGCG TTGCCGGCTG
CTCGCCGGTG CGCTGCGCGG GCGCGGCATT GGCAACGGCG ATACGGTGGC GATGATCGCG
GCCAATACAC CGGAACTGTT CGAGGCGCAT TTCGGTGTAC CGCTTTGCGG CGCCGTACTG
AACACCATCA ACACACGGCT CGATGCCGAC ACGATCGCTT TCATTCTCGA CCACGGCGAC
GCGAAGCTGC TGATCACCGA CCGCGAATTC TCCCCGACAG TGAAGAAAGC CCTGGCACGG
CTTGGCCGCG TCATTCAGGT CATCGACATC GACGATCCAC AGTGTGGAGA AGGCGATCTG
CTCGGCGAAA AAGACTACGA AGCGTTGCTG CAGGAGGCCA CGCACACGGA ATTCTCTGTC
GCGATGCCGG AAGACGAATG GCAGGCCATT TCGCTTAACT ACACATCCGG CACGACGGGC
AATCCGAAAG GCGTGGTGTA TCACCATCGC GGCGCATATC TGAACGCCGT GTCGAATGCA
CTATCGTGGC ATCTGGACGA GGACACGACC TATTTGTGGA CCTTGCCGAT GTTTCATTGC
AATGGTTGGT GCTTTCCCTG GACCATGGCG TTGGTGGCCG GCACCAGTGT CTTTCTGCGC
CATACGCGGG CCGAGCGGAT TCTCGCCGCC ATCCGCACCG AGGCGGTCAC GCATTTTTGT
GCCGCGTCCG TGGTGTTGAA CATGATCAAT AACGCCGCGC CGGAGCTGAA AGCGGGCATT
CGTCACCGAG TCAAGGTCAT GACCGGCGGT GCGCCGCCGC CCGCTTCGGT GATCGCCGGC
ATGGAGTGCA TGGGCTGGGA GGTGACGCAC GCGTACGGGT TGACCGAGTC TTATGGGCCG
GTCGTGCAAT GCGTGTGGCG CGAGTCGTGG AATGCGCTCG AGCTCGATGC GAAAGCGCGA
CTCAAGGCCC GCCAGGGTGT GCGCGGCCCT GTTCTCGAGG CAATGATGGT GGCCCGCCCG
GATACGCTGG AGCCCGTTCC AAAAGACGGG CAAACGCTCG GCGAGGTATT TCTGCGCGGC
AACAACGTCA TGAAGGGCTA CCTGAAGAAT CCGGACGCCA CCGTGGAGGC ATTTTCCGGC
GGGTGGTTTC ACACGGGCGA TCTCGGGGTA TGGCATCCCG ATGGCTACCT GGAAATCAAG
GATCGCTCGA AGGACATCAT CATCTCGGGA GGCGAAAACA TTTCGTCGAT CGAGATCGAG
GACATACTGT ATTCCCATCC CGCTGTTCTG GAGGCGGCAA TCGTCGCGCG TCCCGACGAC
AAGTGGGGCG AGACACCTTG TGCTTTCATC ACGCTCAAAG ACGATTCGGT CGTGACTGAA
GCGGACATCA TCGCGTTTTG CCGCGAGCGG CTGGCACATT TCAAGGTGCC CAAGACCATC
GTGTTCTCGC CACTGCCGAA GACTGCGACC GGCAAGATCC AGAAGTTCAA CTTGAGGGAA
CGAGCGCGCC AGCTGTGA
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| Protein sequence | MKTTADNPYT IGLERDRPNF IALSPLTFLE RAASVWPERT AIVHGTIRRD WAETYRRCRL
LAGALRGRGI GNGDTVAMIA ANTPELFEAH FGVPLCGAVL NTINTRLDAD TIAFILDHGD
AKLLITDREF SPTVKKALAR LGRVIQVIDI DDPQCGEGDL LGEKDYEALL QEATHTEFSV
AMPEDEWQAI SLNYTSGTTG NPKGVVYHHR GAYLNAVSNA LSWHLDEDTT YLWTLPMFHC
NGWCFPWTMA LVAGTSVFLR HTRAERILAA IRTEAVTHFC AASVVLNMIN NAAPELKAGI
RHRVKVMTGG APPPASVIAG MECMGWEVTH AYGLTESYGP VVQCVWRESW NALELDAKAR
LKARQGVRGP VLEAMMVARP DTLEPVPKDG QTLGEVFLRG NNVMKGYLKN PDATVEAFSG
GWFHTGDLGV WHPDGYLEIK DRSKDIIISG GENISSIEIE DILYSHPAVL EAAIVARPDD
KWGETPCAFI TLKDDSVVTE ADIIAFCRER LAHFKVPKTI VFSPLPKTAT GKIQKFNLRE
RARQL
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