| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6499 |
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| Symbol | |
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| ID | 4315403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1179311 |
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| End bp | 1180660 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638154343 |
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| Product | major facilitator transporter |
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| Protein accession | YP_778377 |
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| Protein GI | 115361240 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.270044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAC GGAAAATCAA TGTCTACGAT CTCATCGACA GTCGCAGAAT CGGCAGGAGG
CAGTATTTCA TCGTCGCCTT CTGTGCGCTG CTCATGCTGT TCGATGGCTT CGACACCCAG
GTCATCAGCT TCATCGTGCC CGTTCTCGCG AAGGAATGGC AACTGCCCAA GACGGTATTC
GGCGCGATTT TTTCAGCAGT TTTCTTCGGG CTACTAATCG GTAACTTCAG CATTCCGTTC
GCGACCCGGC GCTTCGGCAC GAAGAAGATC GCTTTCGTGG CAACCACTGC TTTCGGCCTG
TTCACCGTGC TGACCGTCTT TGCCACCAGC GTGCCGCAAC TGATCGCCTT GAGGTTCCTC
ACCGGCATCG GCCTCGGAGC GGCCACGCCT TGCGCGGTGG GCCTCGTTTC GGAATTCAGC
CCAAAGAGAA CCCGCGCGAC TTTCGTCATT CTCGTCTACT TGGGATATGC GCTGGGGTTT
ATCTTCGCGG GCCTCTGCAG TAGCGCGTTG ATCCCGCGGT TTGGCTGGGA AGGTCCACTG
TGGCTGGGCG GGCTCGCGGC ACTGGGCTTG ACGGTGTTGC TTATCCCGCT GCTGCCGGAA
TCCGTGGCCT ACCTGTCGGC AAATGCGGAG CCGGCCGAAT TGCTTCGTTT AACCAAGCGC
CTCTTTCCCG ATTTCACGCT GCAATCGGAC AGCGAACTGG TTACTCACGA GGAGAAGCCG
GCGGACGCAA GTGTGCTCGG ATTGTTCTCC GCACGATTCC GCGTGGGGAC ATTCCTGCTG
TGGGCCGTAT TCGCGATCAA CCTGGCAGCT TTCTATTTTC TGCAAAGCTG GCTGCCGACC
GTTCTCGCGT CCATCTCGTT CCCACCCGCG CTCGTGGTCT GGGCGACCAT CACCGTGATC
ATCGGCGGCA TGGTGGCCAG TCTGCTGATG GGACCCATCA TGGATCGCAC GAGCCCCTAC
AGAATCCTGT CCGCGGTCTA CGTCGGCGGC GCCGTGTCGA TGTACGCGAT CTCGATAGCA
ATCGGCTCAT CGCATCTCGC TTTACTCACG ACGATCTTCT TTTGCGGCTT TTGCATCAGC
GGCGGACAAA CCTGCGCGAT CGCGTTGTGC ACGCTCTTCT ACAGCCCGGA ATTGCGCGCG
CCGGGCGTCG CATGGGCCTA TGGATTCGGT CGGCTCGGCG CCGCGGGCGG CACCTACCTC
GCGGGTGTCC TGTACGCGAA CAACTGGACC GTCGACGCGA TGTTTCGCGT CGCAGCAGCG
CCAATACTCA TTGCCGCGGC TTGCGTGGCC CTGATGGGCG CTTGCTATGG CCTGACGAAG
AGCGGCCTGA AGAAATCCTT TTCCGCCTGA
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| Protein sequence | MEIRKINVYD LIDSRRIGRR QYFIVAFCAL LMLFDGFDTQ VISFIVPVLA KEWQLPKTVF
GAIFSAVFFG LLIGNFSIPF ATRRFGTKKI AFVATTAFGL FTVLTVFATS VPQLIALRFL
TGIGLGAATP CAVGLVSEFS PKRTRATFVI LVYLGYALGF IFAGLCSSAL IPRFGWEGPL
WLGGLAALGL TVLLIPLLPE SVAYLSANAE PAELLRLTKR LFPDFTLQSD SELVTHEEKP
ADASVLGLFS ARFRVGTFLL WAVFAINLAA FYFLQSWLPT VLASISFPPA LVVWATITVI
IGGMVASLLM GPIMDRTSPY RILSAVYVGG AVSMYAISIA IGSSHLALLT TIFFCGFCIS
GGQTCAIALC TLFYSPELRA PGVAWAYGFG RLGAAGGTYL AGVLYANNWT VDAMFRVAAA
PILIAAACVA LMGACYGLTK SGLKKSFSA
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