Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6488 |
Symbol | |
ID | 4315392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 1165552 |
End bp | 1166880 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638154332 |
Product | O-antigen polymerase |
Protein accession | YP_778366 |
Protein GI | 115361229 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCTACA TCACGCTCAT CGCGCTGCTT TTCAGCATCA CGAACTTCAT CCCGGTCAGT GCGATCGGCT TCGCGCCGAT TTGCCTCTGC GCGTGGCGCT TGTTCGACCG GCGTTATCCG CCGTTCGTGA CCTGCTTGTC CGTCTTCGGG CTGTTGGCGT TGGGCTCGAC GCTGCTTTAC GACCCGCAAG CATTGCTGTC GTACGATTTC TACCGCCACG ACGGCAACTT CTTCGTGTCC TATGCGCCGA TTCTTGCCGG TTGCCTGTAT TCGCATGATC TGGATCTCGA CAAGGCGCTG AGACGCTTCT TCGTGTTTGC CGTGCTCGCG AACCTGCCGC CCTATGCCGT CTATGTCGCG CAAAACGGCC TGTTGGCGAT ATTTTCGAAC GCCAACGACT CGTTCGGCAG CTACTTCATT GCCCGTAACG CCGCCGGCGG TTTCCTCGCG ATGCTGTTCT GTCTCGGCTT GGCCTGCTAC GTGAAGCGCC ACGACAAGCT CGTGCTCGGG TTGCTCGTCC TCAACGCGAT GTTCGTGTTT TCCACCTACA GTCGCGGATC GATGCTGGGG ATGGCGACCG CAATCGCGTA TCTATTGCTG GGCCGCAAGC GCTGGTTGGT GGCGGTGCTG ATGGCCGCGG CAGTGGCGTT CTCCTTCGGC GCGGCCTGGA ACCACACGCA ATCGGCAGTC GACTACATGG CCCACGAGCA CACGGTGCGG GATGTGGACG CGAAAACGGC CAACGTGGAC GTGCGCTTCG GATGGCTGTG GCCGCGGGCA TTGGCGTATT TCGAGGCAAG CCCGATCATC GGGATGGGTG TCGGGTCGTT CGACGACGAA GTGCATGACG TCGTGAACTA TTTCGGTGTG GTCGGCCAGC CGCGGGACGT CACCGTGCTC CATACCGATG CGCATGCACA CAATTCCTAC CTGCATATCG CCGCGGAGCT GGGCGTGATC GGTCTCGCGC TGATGCTCGC CTTCTATTGG CATCTCGTCA AATGGGCAGT GGAAGGCGCC GCATCGACGC TGCCTGCGCG CCGCAGCAGT GTCGGCGCGT ATACGTTCGT CGAGTTGTCA TCGGTGTGCC TGCTCGCGAT GGGCACGACG GAGCACCGCC TGACCACGCC GTCGAATGTC CTGATTCTTG CGCTGGTCGT GTCGTTGCTG CTGTCGTGGC GCGTGCGGCG CGCGGGTGGG GCAGCAAAAG TGGCGCGTGC CGCTCCGCGC GGCGTGGCGC TTACGGCAGC GGCGTCACGA CGAGATAGCC AAGGCACGGG CACGGTTTGT CGTCAGCGCC GGGTCGCGGC TCCGGTACGT AGAAGCTGA
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Protein sequence | MVYITLIALL FSITNFIPVS AIGFAPICLC AWRLFDRRYP PFVTCLSVFG LLALGSTLLY DPQALLSYDF YRHDGNFFVS YAPILAGCLY SHDLDLDKAL RRFFVFAVLA NLPPYAVYVA QNGLLAIFSN ANDSFGSYFI ARNAAGGFLA MLFCLGLACY VKRHDKLVLG LLVLNAMFVF STYSRGSMLG MATAIAYLLL GRKRWLVAVL MAAAVAFSFG AAWNHTQSAV DYMAHEHTVR DVDAKTANVD VRFGWLWPRA LAYFEASPII GMGVGSFDDE VHDVVNYFGV VGQPRDVTVL HTDAHAHNSY LHIAAELGVI GLALMLAFYW HLVKWAVEGA ASTLPARRSS VGAYTFVELS SVCLLAMGTT EHRLTTPSNV LILALVVSLL LSWRVRRAGG AAKVARAAPR GVALTAAASR RDSQGTGTVC RQRRVAAPVR RS
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