| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6483 |
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| Symbol | |
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| ID | 4315387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1157846 |
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| End bp | 1159126 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638154327 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_778361 |
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| Protein GI | 115361224 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.45057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACCTA ATCGACGTGA ACGGGCGAAG GCGCCGGGGC TTGAATCCGG CGACAGGACG
GCTGCTTGTC GGCCAGTGGC CGCCGTGGCG GCGAGCACGT CGTGGCTGGC GGTCCTGACC
ATCGCGGCGA TCGTGCTGAA CGGATGCACG CTGGCGCCGG GCATGAGCTT CAGCGACAGT
TCGGCAGGGG GCGCCGCGAC CACCGCACGG TTTGGCGACG CGTCGCGCGC GGTCCACGAT
GCCAGAGGCA CCGGCGGGAA GGGCTCGGCT GCATCCGGAC GCGATTCGGC CCCGGCGGGC
TCGCTGATCG AGATCAATGA CGAGCTGATC CGTACCGAAC GCGCCGCCGT CGAACCGGGC
ATTCCCACCA AAGTGCGCAA ACTGTTTGCC CGGCCCGGCC CCTATACGCT CGGTCCCGGC
GATGTGTTGA GCATCGTCGT CTGGGATCAT CCGGAGCTCA ACATGCCGCC CCCGACGATC
GGCGCCGGCG CGGACGCAGC CGGATCGAAC TCGGTCGTCG CCGGCTATAC GGTCGATTCC
GGTGGCAACG TGCAATTTGC CTATGCCGGC CCGATCAAGC TGAGCGGCCT GACCGAGATG
AAAGCGCGCG ACCTGCTGGC GTCGAAGATC GCTCGCTACA TCCGCAACCC GCAGGTGACG
CTGCGCATAC AGGCATATCG CAGCAAGCGA GTCTATCTCG ACGGAGAAGT GCGCAACCCG
GGCATCCAGA TCCTCAACGA CCTGCCGATG ACGTTGCCCG AGGCGATCAA CCGGGCGGGC
GGCTTTACCG CGAACGGCGA TCGTGCGGCG GTCGCGGTGA CGCGTGGCGA CGATACCGCC
GTCGTCGACA TCGCCGCGAT GATCGAAAAG GGCATCAATC CGGACAAGAT CCTGCTGCGC
GATGGCGACC TCGTGCGCGT GTACTCCGTG AACGACCGAA AGGTGTTCGT GCTGGGCGAA
GTCGGGCGCG CGACCTCGTT GCCGCTCAAC AACGGACGGC TGTCGCTGAA CGAGGCCCTC
GGGTCCGCCG GTGGGGTCAG CCAATACTCG GGCGATGCCG GGCAGGTGTA TGTCGTGCGC
AACAAGCGTC CTGGCAAACC GGAAATTTTC CATCTCGACG CGCGATCGCC GGTCGCAATG
GCGCTGGCCA ACGACTTCGA ACTGAAGCCG AACGATGTCG TGTTCGTCGA TGCGTCGCCG
CTCGTTCGCT GGAGCCGCGT CATCAACATG CTGCTGCCGA GCGCGCAGAC CCTCGCCACC
GGTCGAAACG CTGCGTACTG A
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| Protein sequence | MLPNRRERAK APGLESGDRT AACRPVAAVA ASTSWLAVLT IAAIVLNGCT LAPGMSFSDS
SAGGAATTAR FGDASRAVHD ARGTGGKGSA ASGRDSAPAG SLIEINDELI RTERAAVEPG
IPTKVRKLFA RPGPYTLGPG DVLSIVVWDH PELNMPPPTI GAGADAAGSN SVVAGYTVDS
GGNVQFAYAG PIKLSGLTEM KARDLLASKI ARYIRNPQVT LRIQAYRSKR VYLDGEVRNP
GIQILNDLPM TLPEAINRAG GFTANGDRAA VAVTRGDDTA VVDIAAMIEK GINPDKILLR
DGDLVRVYSV NDRKVFVLGE VGRATSLPLN NGRLSLNEAL GSAGGVSQYS GDAGQVYVVR
NKRPGKPEIF HLDARSPVAM ALANDFELKP NDVVFVDASP LVRWSRVINM LLPSAQTLAT
GRNAAY
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