Gene Bamb_6482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6482 
Symbol 
ID4315386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1155951 
End bp1156796 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content65% 
IMG OID638154326 
Productoleoyl-(acyl-carrier-protein) hydrolase 
Protein accessionYP_778360 
Protein GI115361223 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.630151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.412443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC ATCGTCATGG CAACAATGAC TGGAACTTGA ATGGTGAAAA ACGCCGAACA 
CGTGAATTCC CGCAGCGCGA TCTCCCGCGC GCGGGCAGCA AGCGAGCCGC TCGAGTCCCT
GCTCGCATGC GCCTGATCTG TTTTCCCTAT GCGGGCGGCT CGGCCGCCGT TTATCGTGCG
CTGCAAGCGT TGTTGCCCGG CATCGAAGTG TGCCGTCATG AACTTGCAGG CCGGGGCAGC
CGCCTGTCCG AGCCTGCCGC GCGAGACATG TCGACGCTGA TCGACGCGTT GCTGTGCGAC
CTGGACAACT GCTTCGATCG TCCCTTCGCA CTGCTCGGAC ACAGCATGGG CGCGGCTATC
GCCGTCGAAC TGGCGCTGCG GCTTCCCGCC CGGGCGCGAC CGAATCTGCG GCATCTGTTC
GTGAGCGGGC GCGCCGCACC GGGCAGGGAG CGACCGGTTC GACAGATGCA GGCGCTGGAC
GACCGCGCCT TCGTCGATGC ACTGCACGAG ATGGGCGGCA CACCGAAGCC GGTGCTGGAC
AACAGCGAAC TGATGGCGCT GCTGATGCCG GCGCTGCGTG CGGATTTCAC GCTGATCGAA
AACTACCGGC CCGTGCCCGG GCGCAGGCTC GCGGTGGACA TCACCGCGTT CGCGGGCCGC
GCGGATGAAC ACGCCCCCGT TGATGCCGTT GCAGGCTGGG GCGCGGAGAC GACCGGGCAC
TTCGATTTTC ATGTGATCGA AGGCGATCAT TTCTTTATGA GAAGCGAAAT GCGGACGATG
GCCGGCATCA TCGCGGCACG CCTGCGGCGC ACGGAACACG TTGCGTGGAG CGCACTGCAA
GCATGA
 
Protein sequence
MPTHRHGNND WNLNGEKRRT REFPQRDLPR AGSKRAARVP ARMRLICFPY AGGSAAVYRA 
LQALLPGIEV CRHELAGRGS RLSEPAARDM STLIDALLCD LDNCFDRPFA LLGHSMGAAI
AVELALRLPA RARPNLRHLF VSGRAAPGRE RPVRQMQALD DRAFVDALHE MGGTPKPVLD
NSELMALLMP ALRADFTLIE NYRPVPGRRL AVDITAFAGR ADEHAPVDAV AGWGAETTGH
FDFHVIEGDH FFMRSEMRTM AGIIAARLRR TEHVAWSALQ A