| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6478 |
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| Symbol | |
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| ID | 4315382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1147649 |
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| End bp | 1152073 |
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| Gene Length | 4425 bp |
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| Protein Length | 1474 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638154322 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_778356 |
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| Protein GI | 115361219 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.651287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.801281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCCCG ATACAAAATT CAGGACTGTT ACAGAAATTT TCATATTTCG CGGCAAGGTC
GAACCGGAGA AGAGGGCATT CATTTTTCTC GAGAACGGCG AATCGGAGCG GGCTCGACTC
ACGTTCGGCG ATCTGGACAA ACGCGCGCGC GGCATCGCCG CCAGGCTGCA GGGCATGGCG
CAACCGGGCG ATCGCGTCCT GCTGGTCTAT CCGCCCGGCC TTGAATTCAT CTGCGCATGG
GTGGGATGCC TGTACGCCGG CCTGATCGGC GTGCCGGCCT ATCCTCCGCG CAGGCATCGT
CCCGCCGATC GTCTCAAGGC CATCGTCGCC GACGCCAGCC CGGTCGTCGC GCTGACCGAC
GCAGCCACGC TCGACGGCAT CGCGCATCGC GCGGATGGCT ATTCCGACAC GCTGGAACTG
AAGATCCTTG CGACGGACCA GGGCTTCGAC GCACCGGCCG AACAATGGCG CGCACCGGAC
ATCACGCCGC AGACGCTGGC GCTTCTGCAA TACACGTCAG GCTCCACCGG TACGCCAAAA
GGCGTGATGA TCAGCCACGC GAACATCCTG AGCAATATGG CGGTCATCGC CGAGGCGAGC
GATGCCGATG CGTCGACGGT GTTCGTCAGT TGGCTCCCGG TGTTTCACGA CATGGGTTTC
TTCGGGAAGG TGCTGCTGCC GATCTATCTC GGTGTGCCGG CAGTGCTGAT GGCGCCCGCG
GCGTTCGTGC AGAAACCCAT CCGCTGGCTG CAGGCAATCA CGAAGTATCG CGGCACGCAT
TGCGCCGCGC CGGATTTCGC GTACGACCTG TGCGCGCGCA AAATATCCGA TGAAGCCCGC
GCGCTGCTGG ATCTGAGCAG TTGGCGCGTT GCATTCAACG GCGCGGAACC GGTGCGCGCG
GAGTCGGTGG CGCGTTTTTC GCGCGCCTTC GCCGCATGTG GCTTCCACGC GCACACCATG
CGCCCGGTCT ACGGCATGGC CGAGGCGACC TTGTTCATCT CCGGTCAGCC GGCCCGCTCG
CTGCCGCTCG TGGCGGACTA CGACGCCGAC GGCCTCGCAC GAGGCGTGGC GACGAGAAGC
GACGGCGGCA AGCGCCACGC GCTGGTGTCG TGCGGCCGGG CCTGGGCGGA GCACCGCCTG
CAGATCGTGA ATCCGGATAC CGGTGAGCGC TGCCCGCCCG ACCGGATCGG CGAGATCTGG
GTGACGGGCC CGAGCGTCGG CGTCGGTTAC TGGAACCGCG TCGACGAAAC GGAGCACACC
TTTCGCGCGA AGCTCGATGG CGATGATGCG CATTACCTGC GCACGGGCGA TCTCGGCTTC
GTCGATGGCG AGAACCTCTT CGTCACCGGC CGTCTCAAGG ACCTCATCAT CGTCGCCGGG
CGCAATCACT ACCCGCAGGA TCTCGAGCAA TCGGCCGAGG GCAGCCACCC CGCGCTGGCG
CCCAACGCGT CGGCGGCTTT CTCGATCAAC GTCGATGACG TGGAGCGGGT CGTCATCGCA
TGTGAAGTGC GCCGGGAAGC GCTCAACACG CTGGACGCGG AAGCCGTCGC TGCGGAGATC
CGGCGCAAGC TCGCCGAAGC ACATGACGTC GATCTGTATG CGGCGATCCT GTTGAAGCCC
GCCACGATCC TGCGCACGTC CAGCGGAAAA ATCCAGCGGA GCCGAATCAG GCAAGCGTTC
CTCGATGAAC AGGGGCTCGC GATCGCGGGC GAGTGGCGGC GTTCGTTCTC CGCGACGTAC
GCACCCTCCA CGGCCGCGCT ACGCGACACG CAAACGCTGG TGCAATGGTG CGTCGAGCGT
GTCTCGCGTC TGTCGGGAAT CGATGCCGGC AAGATCGACC CCGACGCGCC GTTCAGCATC
TACGGGCTCG ATTCGAAGGA CGCCATCATG CTGTCGGGCG AGTTGCAGGA CTGGCTCGGG
CTGCCGGTCT CGCCTACCGT CGTCTACGAT TTTCCGAGTA TTTCCCTGCT GGCGCGCCAT
TTGAGCGGTA CCGGGAATGC CGTGCCGGAC CACGCGCCCG GTTCCGCCGC AGCGCGCGCG
GATATCGCGA TCGTCGGCAT GGGATGCCGT TTCCCCGGCG CCGGTCATCC CGACGCATTC
TGGCAGCTGC TGCTGGAGGG CCGGGACGCG GTCGGCGCGT CGAAGAAGCG TGCCGGCGAC
CTGCCGCCCA CCGGACTGCT GGACCAGGTC GATCTGTTCG ATGCGGCGTT CTTCGGCATC
AGCGCCCGCG AAGCCGAAGC GATGGATCCG CAACAGCGCC TGCTGCTCGA GGTCGCGTGG
GAGACGCTCG AGCATGCGGG GATCGCGCCC GGGCGTCTCG CCGGCGGACG CACCGCGGTC
ATCGTGGGCA TCAGCAATTC GGACTACATC CGTCTGGCGC AGGAAGAAGT CGCGGATGTC
GGCCCTTATG TCGCGACCGG CAATGCGCTC AGCGTCGCCG CCAACCGCAT TTCCTACACG
CTCGATTTGC GCGGTCCGAG CTGGGCGGTC GATACCGCGT GTTCGTCCTC GCTCGTCGCG
GTTCACCACG CGTGCCGCGC GCTGCAGCGC GGCGAGGCCG ATGCGGCGCT GGCCGGCGGG
GTCAACCTGA TTCTGGCGCC GCAATTGAGC GACTCCTTCA CGCAAGCCGG CATGCTTTCG
CCGGATGGCC GATGCAAGGC GTTCGATGCG GCAGCCAACG GCTATGTGCG CGGCGAAGGT
GCGGGCATGG TGCTGCTCAA GCGTCTCGAC GATGCACTCG AGCACGGCGA CACCGTGTAC
GCCGTGATCC GCGGCTCGGC GGTGAACCAG GATGGACGCA GCAATGGCCT GACCGCGCCG
AACGGCCCGG CCCAGCAGGC CGTCATTCGC GGTGCGCTGC ACGATGCCGG CGTACGCGCG
CAGGACATCG GCTTCGTCGA AGCGCACGGT ACGGGAACGC CGCTCGGAGA TCCGATCGAA
TTGAACGCGC TGGCGGCCGT CCTGGGCGAA TCCCGTCGGC CGGACGATCA CTGCTGGATC
GGCTCGGTCA AGACCAACAT CGGCCATCTG GAATCGGCGG CGGGCATCGC CAGCCTGATC
AAGACCGCCC TTGCGCTACA CCATCGCGCC ATTCCGCCGA ACCTCCATTT CCGGTCGATC
AATCCTGAAA TCGCGCTCGA CGGCACGCCC TTCCGTATTC CGCAGCAGGT CACGCCGTGG
CATTCGGAAC ACGGGCCGCG CATGGCCGGC GTGAGTTCGT TCGGTTTCGG CGGCACCAAC
GCCCACATGA TCCTGTCCGA AGCGCCACGG CCCGGCGAGA TCGAAGCCGA CCCGGCGGCG
CCCGCGGCGC GCGTCGTGAC GCTTTCCGCG CGCACCCCCG AAGCGTTGCA GGCACTGGCG
GCGTCCTATG CGGCGTATCT CGACGCCCAT CCCGGGATCC GTGTGCGCGA TGTCGCGTTC
ACGGCAAATA CCGGGCGCAC CCACTTCACG CGGCGAGCGG CCATCGTCGC GTCGAGTCTC
GATACGTTGC GTTCGCAACT GGATGCCGTG TCGGCCGGCG AGCCTGCCGA CACGCCGCCT
GCGGTGACAT TCCACTTTTG CGCCGACCAC GGCGGCAGCG ACGACGCGGT GCGGCAATTG
CGTTCGGCCT GCCCCGCTTT CGGCGCGCTG ATGCAGCGGC AATCGGCGGT GTCCGACGCG
CCCGCGGTCG ATTCCGCCGC AGCCGGGTTC ACGGCATTCC AGCGCGCGCT CGCGCAACTG
TGGATGTCCT TCGGCATCAC GCCGGGCGCC GTCAGCAGCA CGGGCGACGG GCATCGCGCC
GCGGCCGCGT TTGCGGACGT GCCGCAGGCG CCGGACGGCG CCGCGGCGGG AAGCCACGGC
ATCGTGATCG AAATCGGCGC GCACACGGCC GCGTGGGACA CGATCCTGCG CACGCTCGCC
GAACTCTACG TACGCGGCGC GTCCATCGAC TGGGATGCCG TGGAGCAGGA CGCCCCGCGC
CGCCGGCTCG CGCTGCCGAC CTACCCGTTC GAGCGTCGCG CGTTCTGGAT CAGTCCACGT
GCGCCGCGGC ATCCGTTGCT CGGGCGTCTC ATGGAGCAGC ACGCGCATGC GCCGGCCACG
TGGATCTGGC AGTCGCGTCT CGACGCGCCG GCCACCACCT TTCTCAGCGG TCATCGCGTC
AAGGGATCGC CCGTGCTGCC CTATTCCGCC TATGTGGAAA TGGCGCTGGC GGCGACGTCG
GAAATCGGCG CCGCCAGTCA TACCACGTTG AAGGACCTCG CACTGCATGC GCCGTTGCCG
CTGCATCCGC ATGCATCGCA CAGCGTGCAG ACCGTGCTGA GCCGCCGGTC CTGGGGACCG
TTTTCGTTTG CCGTCTATCA CCGGATCGAG GACACCCGCG CCGCCGCGTC ATGGCAGATA
TGCGCGAGTG CCGAAATTCA CGAATCGGAT CGGAGCCACG CATGA
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| Protein sequence | MLPDTKFRTV TEIFIFRGKV EPEKRAFIFL ENGESERARL TFGDLDKRAR GIAARLQGMA
QPGDRVLLVY PPGLEFICAW VGCLYAGLIG VPAYPPRRHR PADRLKAIVA DASPVVALTD
AATLDGIAHR ADGYSDTLEL KILATDQGFD APAEQWRAPD ITPQTLALLQ YTSGSTGTPK
GVMISHANIL SNMAVIAEAS DADASTVFVS WLPVFHDMGF FGKVLLPIYL GVPAVLMAPA
AFVQKPIRWL QAITKYRGTH CAAPDFAYDL CARKISDEAR ALLDLSSWRV AFNGAEPVRA
ESVARFSRAF AACGFHAHTM RPVYGMAEAT LFISGQPARS LPLVADYDAD GLARGVATRS
DGGKRHALVS CGRAWAEHRL QIVNPDTGER CPPDRIGEIW VTGPSVGVGY WNRVDETEHT
FRAKLDGDDA HYLRTGDLGF VDGENLFVTG RLKDLIIVAG RNHYPQDLEQ SAEGSHPALA
PNASAAFSIN VDDVERVVIA CEVRREALNT LDAEAVAAEI RRKLAEAHDV DLYAAILLKP
ATILRTSSGK IQRSRIRQAF LDEQGLAIAG EWRRSFSATY APSTAALRDT QTLVQWCVER
VSRLSGIDAG KIDPDAPFSI YGLDSKDAIM LSGELQDWLG LPVSPTVVYD FPSISLLARH
LSGTGNAVPD HAPGSAAARA DIAIVGMGCR FPGAGHPDAF WQLLLEGRDA VGASKKRAGD
LPPTGLLDQV DLFDAAFFGI SAREAEAMDP QQRLLLEVAW ETLEHAGIAP GRLAGGRTAV
IVGISNSDYI RLAQEEVADV GPYVATGNAL SVAANRISYT LDLRGPSWAV DTACSSSLVA
VHHACRALQR GEADAALAGG VNLILAPQLS DSFTQAGMLS PDGRCKAFDA AANGYVRGEG
AGMVLLKRLD DALEHGDTVY AVIRGSAVNQ DGRSNGLTAP NGPAQQAVIR GALHDAGVRA
QDIGFVEAHG TGTPLGDPIE LNALAAVLGE SRRPDDHCWI GSVKTNIGHL ESAAGIASLI
KTALALHHRA IPPNLHFRSI NPEIALDGTP FRIPQQVTPW HSEHGPRMAG VSSFGFGGTN
AHMILSEAPR PGEIEADPAA PAARVVTLSA RTPEALQALA ASYAAYLDAH PGIRVRDVAF
TANTGRTHFT RRAAIVASSL DTLRSQLDAV SAGEPADTPP AVTFHFCADH GGSDDAVRQL
RSACPAFGAL MQRQSAVSDA PAVDSAAAGF TAFQRALAQL WMSFGITPGA VSSTGDGHRA
AAAFADVPQA PDGAAAGSHG IVIEIGAHTA AWDTILRTLA ELYVRGASID WDAVEQDAPR
RRLALPTYPF ERRAFWISPR APRHPLLGRL MEQHAHAPAT WIWQSRLDAP ATTFLSGHRV
KGSPVLPYSA YVEMALAATS EIGAASHTTL KDLALHAPLP LHPHASHSVQ TVLSRRSWGP
FSFAVYHRIE DTRAAASWQI CASAEIHESD RSHA
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