| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6474 |
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| Symbol | |
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| ID | 4315378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1125367 |
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| End bp | 1129281 |
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| Gene Length | 3915 bp |
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| Protein Length | 1304 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638154318 |
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| Product | amino acid adenylation domain-containing protein |
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| Protein accession | YP_778352 |
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| Protein GI | 115361215 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01720] non-ribosomal peptide synthase domain TIGR01720
[TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.571102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAAC TGAATCTCAA CACGCTCTCG ACCAGCGGGC AATACCAGGA ACACGTGGCG
TTCTGGAGCG ACGCGCTCGG TCGCCTCGAC GAAGACTTCC GGCTTCAGCA GGCGTGGCAA
GCCTATGCGC TGCCGCCTGG CCCTGCACCG GAACTGACGT TCGAGCTCGA CGGCGACGCG
TCGCAGGTGC TGGAGAAGCT CGCTGCCGGC CAGGCGTTGG GCGCTTTCGT CGTGCTGCTG
GCGGCCCTGT TCCGTGTCCT CGGGCGCTAC GACGGCACGG CCGGCCTGTT CGTGGAGTCC
CCGCACCTGA TCGTCGAACC CGCGAGCGGT TCCGCCGACC CCGTCCCGCT GTTCGACGCC
ATCCAGCCCG GCCCCACGGT GCGCGCGTAT CTGAACCAGG TTCGCGACAG GGTGCAGCGC
AGCTATTCGT ATCAGGACTT TCCGATCGCC GCGCTGGCGC ACAAGCTGCA TGGCGAGCGC
CGCACGACCA ACGTAGGCGT GCGCTTCGAC GGTCTTCATG AAGACTGGGC GTCGGCGGAT
CACGACCTGT CGATCGAGAT CCGGCATCGC GAGCGCTACG AGATCGTGCT GACGGGCCGG
CCGACTGTGT TCACGCTGCA TTATCTCCAG CATGTCGCGC GACACCTGCG CAACGTCCTG
GCCGGTTTCG GCACGCTGGA TGCGCCGCTC GACACCGTCT CGCTGCTCGA CGACGACGAA
CGTGCACGAC TTCGTTCGCA TGCGGCGCCC GTCGCGGTGC AGGGCACCTT CCTGGCGCAG
TTCGCGCAAC GGGTCGCGGC CGCGCCGGAC AGCATCGCCG TGGCGACCGC CGACGCATCG
CTGACCTATG CCGAACTGGA CGATCAGGCG TCGCGGCTCG CGAGCTTCCT GCTCACGGAA
TACGCGATCG AACGCGGCGA CGTGGTGGGC GTGGTGGCCG ACCGTTCCGA GCGCTGGATC
GTCGGCCTGC TCGGCGCGCT CAAGGCGGGC GCGGTGTATC TGCCGCTCGA CCCGGAGTTT
CCGCAGGAGC GCCTGCGCTT CATGATCGAG GACGCGAAGG TCAAGGCGCT GCTGACGCAC
TCGGAACACC TGCCGCTGCT CGCCGATTTC TGGGCGATTC CGATGTTCGC CCTCGACTTT
CAGCTCGACA CGCTGGCACC CGCATCGGCG TCGGCGCAGG TCGAGGTCCG GCCTGACGAC
GCCGCGTACA TCATCTATAC GTCCGGCTCC ACGGGCGTGC CCAAGGGCGT CGTGCTCGAA
CACGCAGGCC TCCTGAACAT GGCGCAATAC CATGTGGACG CCTTCGGTTT CGATGCCGCC
GACCGCTTCG TCCAGTTCTA CTCCCCGGGC TTCGACGGCT CGATCATGGA GATTTTCGTC
ACGCTGCTCG CGGGCGCGCG CCTGGTGCTG GCGAAGCCTG CCGTGATCCG GGACGTGCCG
CGTTTCGTCG AATATATCGC GCAGCAGGGC GTCACCACCG TCAACGCGAC GCCTGCCTAT
CTCGCCGCGC TCGACTGGAA CGCGCTCGGC GCCGTGAAAC GGGTCATCAG CGCGGGCGAC
AACGCCCGCG TGGCGGATCT CCGCGAGCTG GCCCGCACCC GCACGTGCCA CAACTCGTAC
GGCCCCACCG AGGCCACCGT CTGCATCGCG GACTACGTGG TCGATCCGGC CACTGCCTAC
GGCGCCCGTC TGCCGGTCGG CCGGCCGATC CACAATACGC ACCTGTACCT GCTCGACGAG
CACGGGGCAC TGGCGCCCGA GGGCTGCACG GGGGAGATCT GCGTGTCCGG CATCGCGCTG
GCGCGCGGCT ACGTCGGCCG GGACGACCTG ACCGCCGCCG CTTTCGTCGA CCACCCGTTC
GAGTCGGGCG AGCGCCTCTA TCGCACCGGC GACCTCGGCG TCTGGCTGCC TGACGGCAAC
CTGGAAGTCA CCGGGCGCCG CGACATGCAA GTGAAGATTC GCGGCTATCG CATCGAAATG
GGGGAAATCG AAGCGGCGCT CAGGCAGCAC GCCGACGTCG CGGACGCGAT CGTGTTCGTG
CGCGAGGACA CGCCGCAGCA TCGGCAGCTG GTGGCCTGCG TCGAGACGGC GACGGCCAGC
GTCGCCGGCC TGCGGGAATA CCTGAAGGAA CGCCTGCCCG AGTTCATGGT GCCGGGATCG
ATCGTGACGC TCGAACGGCT GCCGCTGACG CCGAACGGCA AGCCCGACCG CAAGGCGCTC
GCCGCGTTGG AACTGGCGCC CGTGGCGAGC GAAACCGAGT ATGCCGCGCC GACCAACGAC
GTCGAGGCGC GCCTGGGCAC GATCTGGTCC GAGGTGCTGG GCCGCGAGCC GATCGGCGTG
CACGACAATT TCTTCGAACT GGGCGGCGAC TCGATCCTGC TCATTCAGGT GATGTCGCTG
GCCCAGCAAG TCGGCCTCCG ATTCACCGCC GATCAGTTTT TCGCCCATCC GACCATCGCC
GACCTCGCCC GGGTTGTCGT GGATGCGCCA CCCATCAGGA TTCCTCAGGA GCCGGTGGTC
GGTCCCGCCC CGCTGACGCC GATCCAGCAT TGGTTCTTCG CGCAAAACGT GGCGGATCCG
CACCACTACA ACCAGTCGAC CATGATCGAG GTGCCCGCGT CGCTGCGGCC GGACGTGATC
GAGCACGCGC TGGCGGCTGT CGCGACGCAT CACGACGCGC TGCGGCTGAG TTTCGAGCGC
GTCGCCGGCG CGTGGCAGCA GTCGCATGCG GCGCCGCCGC TGGCGATCCC GCTCGGCGTC
ACGTCGCTGG CCGGCGCGGC GCCCGCCATG CGGCAGGCCG AGATGCTCGC GACCGCCACC
CGCATGCAGG AAAGTTTCAC GTTGTCCGCG CCGCCGCTGC TGCGCGCCCA TCTGTTCCAG
TTCGGTCCCG GCGAGCCGCA GCGCCTGCTC GTGGTGGCGC ATCACCTGGT GATCGACGGC
GTCTCGTGGC GCATCCTGTT CGAAGACCTG TACACGGCGT GCCGCCAGAT CGAGGCGGGC
GAAGCGGTGC AGTTCCCGGC CAGGACGACG GCCTGGCGCG ACTGGTCGAC GCGTCTGTCC
GAACTCGGCG CGAGCGCGCT CGACGGACTG GACTATTGGC TCCACGCGAA CGCCGAAGAA
CCGTCCGGCT TCGACGACAT GCCGGTCGGC ACCGTCGCCG AAGCCGGCTC GACGTTCATC
GAGTTCGACG CCCAGCAGAC GCTCGCGCTG TTGCAGGACG TGCCGCGCGC GTTCAACACC
CAGATCAATG AAGTCCTGCT GACGGCCCTG CTGCTCGCGT TCGGCGACTG GACCGGCAAC
GCTTCGCTGG TCGTCGATCT CGAAGGCCAC GGCCGCGAGG ACCTCTTCGA CGGTGTCGAT
ACGTCGCGCA CCATCGGCTG GTTCACCGCG CACTATCCGG TGTTCCTGAA TGCCGGCGAC
GCCACCGTGG CGGCCGAGGC GTTGCGCAAC GTCAAGGAGC AGTTGCGCGC GGTGCCGATG
CGCGGGCTCG GCTACGGCAT CGCACGCTAC CTCGGCAAGG ACGCCGGCAT CGCGGCAGCA
CTGGAACGGC AGCCGCCGGC GCCGGTGCGC TTCAACTATC TCGGCCAGAT CGATCGCGTG
CTGACCGACG ACACGGGCTG GAAGCCGGTG CTCGACTTCC AGAGCCCCGA GCACAGCGCA
CGCGCGCGGC GCGGCCATCT TTTCGAGATC GACGGGATGG TGTGCGACGG GCGTTTGCGC
CTGACCTGGC ACTACAACCG GGAAGCCTGC GCGCCGGACG TCATCGCGCA GCTGACGCAG
TGCTACCGCA GCCGTCTGCT GTCGATCGTC GCGGCCAGCG GCGGCGACCC GCGCGGGCTG
AGCCCGACGG ATTTTCCGGC CGCGCGCATC AGCCAGGAAG CATTGGACGC GCTTGTCTCA
AGGATCAAAT CGTGA
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| Protein sequence | MSELNLNTLS TSGQYQEHVA FWSDALGRLD EDFRLQQAWQ AYALPPGPAP ELTFELDGDA
SQVLEKLAAG QALGAFVVLL AALFRVLGRY DGTAGLFVES PHLIVEPASG SADPVPLFDA
IQPGPTVRAY LNQVRDRVQR SYSYQDFPIA ALAHKLHGER RTTNVGVRFD GLHEDWASAD
HDLSIEIRHR ERYEIVLTGR PTVFTLHYLQ HVARHLRNVL AGFGTLDAPL DTVSLLDDDE
RARLRSHAAP VAVQGTFLAQ FAQRVAAAPD SIAVATADAS LTYAELDDQA SRLASFLLTE
YAIERGDVVG VVADRSERWI VGLLGALKAG AVYLPLDPEF PQERLRFMIE DAKVKALLTH
SEHLPLLADF WAIPMFALDF QLDTLAPASA SAQVEVRPDD AAYIIYTSGS TGVPKGVVLE
HAGLLNMAQY HVDAFGFDAA DRFVQFYSPG FDGSIMEIFV TLLAGARLVL AKPAVIRDVP
RFVEYIAQQG VTTVNATPAY LAALDWNALG AVKRVISAGD NARVADLREL ARTRTCHNSY
GPTEATVCIA DYVVDPATAY GARLPVGRPI HNTHLYLLDE HGALAPEGCT GEICVSGIAL
ARGYVGRDDL TAAAFVDHPF ESGERLYRTG DLGVWLPDGN LEVTGRRDMQ VKIRGYRIEM
GEIEAALRQH ADVADAIVFV REDTPQHRQL VACVETATAS VAGLREYLKE RLPEFMVPGS
IVTLERLPLT PNGKPDRKAL AALELAPVAS ETEYAAPTND VEARLGTIWS EVLGREPIGV
HDNFFELGGD SILLIQVMSL AQQVGLRFTA DQFFAHPTIA DLARVVVDAP PIRIPQEPVV
GPAPLTPIQH WFFAQNVADP HHYNQSTMIE VPASLRPDVI EHALAAVATH HDALRLSFER
VAGAWQQSHA APPLAIPLGV TSLAGAAPAM RQAEMLATAT RMQESFTLSA PPLLRAHLFQ
FGPGEPQRLL VVAHHLVIDG VSWRILFEDL YTACRQIEAG EAVQFPARTT AWRDWSTRLS
ELGASALDGL DYWLHANAEE PSGFDDMPVG TVAEAGSTFI EFDAQQTLAL LQDVPRAFNT
QINEVLLTAL LLAFGDWTGN ASLVVDLEGH GREDLFDGVD TSRTIGWFTA HYPVFLNAGD
ATVAAEALRN VKEQLRAVPM RGLGYGIARY LGKDAGIAAA LERQPPAPVR FNYLGQIDRV
LTDDTGWKPV LDFQSPEHSA RARRGHLFEI DGMVCDGRLR LTWHYNREAC APDVIAQLTQ
CYRSRLLSIV AASGGDPRGL SPTDFPAARI SQEALDALVS RIKS
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