| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6469 |
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| Symbol | |
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| ID | 4315373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1103736 |
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| End bp | 1105439 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638154313 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_778347 |
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| Protein GI | 115361210 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCCG CTCAAAGTAA ATCGCCGCCG TGGCATTCGG CCGCCACCCT GATGTGGCGC
AGTCATCCCT GGTTAACGCT GGGCACGGTC CTGACGGGCC TCGTCAGCGG CATCGCGTCG
ATCGTGGGCG TCGGATTGAT CAGCCGGGTG CTGCATGACG GGGAGGATCG ACAGACGCTG
TTGCTGCTGT TCGTTGCGGT GAATGTCGTC GCCGTTCTAT GCAGAAGCAG TGCTGCCGTG
ATGCCCTCCT ATGCGTGCAT GAAAGTCATG ACGAAATTGC GCGTCAACCT GTGCAAAAGG
ATCCTGGCGA CCCCGCTCGA TGAAATCGAC AGGCGCGGCG CCCCGCATGT GCTGACCATG
CTGACTCAGG ACATTCCGCA ACTGAGCCAG ACCCTGCTCA CCCTGCCGAC GATCATTGTT
CAATCCGTCG TCTTGATATG CAGCATCGTC TATCTCGCCT ATCTCTCGTG GATTGTCTTC
GCTTCGACGA TCCTCCTGAC CATCGTCGGC CTGGTGCTTT ATCTGTTTTT CTATCGAAAG
GCGGTCAATT TCACGGAGCG GGTGCGCGAT GAATTTGTCC AGTTCAATGA ATATACGCAT
GGCCTCGTGT TCGGCATCAA GGAGCTCAAG CTCAACCGGG CGAGGCGGCG CTGGTTCACC
CGAGCCGCGA TCGAATTGTC GTCGAAGCGC GTGGCAGGAT TCAATTACAT CGAACGCTTC
TGGTTCATGG GCGGCGACAG CATCGGCCAG ATCACGGTAG CGGTCCTGCT CGGATTCCTG
CTGTTCGGCG TACCTTCGCT CGGCGTCGTG GCCCCTTCCG TACTCACGGC GAGCATTCTG
GCCGTTCTGT ACATGATGGG CCCGCTGACC ATGCTGATCA ATATTCTGCC GATCGTGGCC
GAAGGCAAGA CCGCGCTCGC GCGGTTGGCG GAATTCGGCT TTCTGCTCGA CGACACGCAG
GATTCACCCA AGGAACCGGC CGCCGCTGGC ACCGGGGAAT CGTCATCGGC AAAGCCATGG
AAGCGCATCG AGCTGCAAGA CGTGAAGATG AACTACCGCG ACAACGAGTC GTCGGCCGAC
TTCGTGCTTG GCCCCATCAA TATGACGATT CATGCCGGCG AGCTCGTCTA TGTCATCGGT
GGCAACGGCA GCGGCAAGAG CACGTTGGGC AAGGTACTCA GCGGCCTCTA TGCGCCGACT
GAAGGCCATA TTGCGCTCGA TGGACAAGTC ATCGACGACG ATGCCAGGGA ACGGTACCGC
AACCTGTTTT CCGCCGTATT CACCGATTTC CATTTGTTCA ACCGCATCAT CGGGCCGGAT
GGGGAAAATG GCAGCATCGA ACTTGCGCGG CAATACCTCG ACACGCTGAA ATTGGCGGGC
AAGGTCGAGA TCAACGGCAA GACGTACTCG ACGACCAGGG CTTTATCGAC AGGACAACGC
AAGCGGCTGG CGTTGCTTTG CGCGTACATC GAAGATCGTC CGATTTACAT CCTGGACGAA
TGGGCCGCCG ATCAAGATCC GGTTTTCAAG CGATTTTTCT ATGAAGTGCT GGTTCCCGAT
CTGAAATCCC GCGGGAAATG CGTCGTGATC ATCACCCATG ACGATCAGTA TTTCAAGCTG
GCGGACCGCG TCATTCGCCT GGATAGCGGC CGCATCTTCT CCGATACGGC CATGTGTGCC
GTGCGAGCCG AAGTCGCGGG ATGA
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| Protein sequence | MDSAQSKSPP WHSAATLMWR SHPWLTLGTV LTGLVSGIAS IVGVGLISRV LHDGEDRQTL
LLLFVAVNVV AVLCRSSAAV MPSYACMKVM TKLRVNLCKR ILATPLDEID RRGAPHVLTM
LTQDIPQLSQ TLLTLPTIIV QSVVLICSIV YLAYLSWIVF ASTILLTIVG LVLYLFFYRK
AVNFTERVRD EFVQFNEYTH GLVFGIKELK LNRARRRWFT RAAIELSSKR VAGFNYIERF
WFMGGDSIGQ ITVAVLLGFL LFGVPSLGVV APSVLTASIL AVLYMMGPLT MLINILPIVA
EGKTALARLA EFGFLLDDTQ DSPKEPAAAG TGESSSAKPW KRIELQDVKM NYRDNESSAD
FVLGPINMTI HAGELVYVIG GNGSGKSTLG KVLSGLYAPT EGHIALDGQV IDDDARERYR
NLFSAVFTDF HLFNRIIGPD GENGSIELAR QYLDTLKLAG KVEINGKTYS TTRALSTGQR
KRLALLCAYI EDRPIYILDE WAADQDPVFK RFFYEVLVPD LKSRGKCVVI ITHDDQYFKL
ADRVIRLDSG RIFSDTAMCA VRAEVAG
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