Gene Bamb_6459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6459 
Symbol 
ID4315363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1088274 
End bp1089041 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content69% 
IMG OID638154303 
ProductABC transporter related 
Protein accessionYP_778337 
Protein GI115361200 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG CGGTCGTTCG CGCGGTCGAC GTACGCAAGT CGTACGGCGA TTTCCAGGCG 
CTGCACGGCA TCACGCTCGA CGTCGAGCCG GGTGAAGTGC TGTGCATCAT CGGCCCGTCG
GGCTCGGGCA AGAGCACGTT CCTGCGCTGC ATCAACCAGC TCGAGACGAT CAGCGCCGGC
GCGCTGTGGG TCAACGGCGA ACTGGCCGGC TACCGGCGCG CCGGCGACCG GCTCCACGAA
CTGTCGGAGC GTCAGGTTGC GCGCCAGCGG CTGGCGACGA GCATGGTGTT CCAGCGCTTC
AACCTGTTTC CGCACAAGAC CGCGTTCGAG AACGTGATCG AAGGCCCGGT GCAGGTGCTC
AAGCGCCGCC GCGCGCAAGC GGAGGAGGAA GCGCGCGCGC TGCTCGCGCG CGTCGGGCTC
GCGCACAAGT GCGACGCGTT TCCGGTCGAG CTGTCCGGCG GCCAGCAGCA GCGCGTCGCG
ATCGCGCGGG CGCTCGCGAT GCATCCGCAA CTGATCCTGT TCGACGAACC GACGTCGGCG
CTCGACCCCG AACTGGTTGG TGAAGTGCTG GCCGTGATGC GCGACCTCGC GAAGAGCGGG
ATGACGATGA TCGTCGTCAC GCACGAGCTC GGGTTCGCGC GCGAGGTGGC CGACCGCGTG
GTGTTCATGG ACGGCGGCCG GATCGTCGAG AGCGGGCCGC CCGGCCAGGT GCTGTCCGCG
CCGACGCATG CGCGCACGCG CGAGTTCATC TCCGCCGTGC TTGCATGA
 
Protein sequence
MTNAVVRAVD VRKSYGDFQA LHGITLDVEP GEVLCIIGPS GSGKSTFLRC INQLETISAG 
ALWVNGELAG YRRAGDRLHE LSERQVARQR LATSMVFQRF NLFPHKTAFE NVIEGPVQVL
KRRRAQAEEE ARALLARVGL AHKCDAFPVE LSGGQQQRVA IARALAMHPQ LILFDEPTSA
LDPELVGEVL AVMRDLAKSG MTMIVVTHEL GFAREVADRV VFMDGGRIVE SGPPGQVLSA
PTHARTREFI SAVLA