| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6442 |
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| Symbol | |
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| ID | 4315346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 1072977 |
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| End bp | 1073729 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638154286 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_778320 |
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| Protein GI | 115361183 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTAA AGGGTAAAAC CGCGTTGATT ACCGGCGCAA CCAGCGGCAT CGGTCTGGCT
ACCGCCGAGT TGTTCGTGCG CGAGGGCGCG CAGGTAGCGA TCACCGGCCG CGACGAGGCA
CGGCTGAAGC GTGCGCGCGC GAAGCTGGGC GGTGCGGTCA CGACCATCCA GGCCGACGTG
CGCAACAGCG AGGACATGAA GCGGATGGCC CGACAGGTCG CGGACGCCTT TGGCGACGAC
GGGCTGGATG TCTTTTTTGG CAATGCCGGT GTGGCGTTCT CCACGCCGCT GCTGACCACG
GATGAGGCCC GCTTTGACGA ACTGCTGGCA GTCAACGTCA AGGGGCTCTT CTTCTCCATG
CAGGCCGTGA CACCCGTGCT GCGCGATGGG GCGTCGGTGA TTCTCAATTC TGCATGGCTC
AACAATGTTG GCATGGGCGG TTTCTCGGCG CTTGCTGCCA CGAAGGCGGC GGTTCGCTCG
TTCGCGCGCT CGTGGTCCTG CGAATTGCTG GATCGCAAGA TACGGGTCAA TGCCGTCAGC
CCCGGCGCGG TCGATACGCC AATCTTCGAG TTGGAAGGTG CAACGCCCGC GCAGCTGGCT
GAGACGAAAC GTCAGATGTC CTTACAGATT CCGGCCGGCC GCATGGGGGA GCCGATGGAA
ATTGCCCAGG CCGTGCTATT CCTTGCCAGC GATGATTCAC GCTACATGAT GGGCGCCGAA
ATCGTCGTCG ATGGCGGATT CGCGCAGCTC TGA
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| Protein sequence | MRLKGKTALI TGATSGIGLA TAELFVREGA QVAITGRDEA RLKRARAKLG GAVTTIQADV
RNSEDMKRMA RQVADAFGDD GLDVFFGNAG VAFSTPLLTT DEARFDELLA VNVKGLFFSM
QAVTPVLRDG ASVILNSAWL NNVGMGGFSA LAATKAAVRS FARSWSCELL DRKIRVNAVS
PGAVDTPIFE LEGATPAQLA ETKRQMSLQI PAGRMGEPME IAQAVLFLAS DDSRYMMGAE
IVVDGGFAQL
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